RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SCML1Q9UN30 329 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 KCTD3Q9Y597 815 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 H0Y858 1186 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 SPINT1O43278 529 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 RPP40O75818 363 aaKnown RBP19.28■□□□□ 0.68
RPS28-202ENST00000449223 ADRB3P13945 408 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 COL9A1P20849 921 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 GCAP28676 217 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 VIPR1P32241 457 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 PSMD8P48556 350 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 IFFO1Q0D2I5 559 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 ELP6Q0PNE2 266 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 LRRC66Q68CR7 880 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 ERAP2Q6P179 960 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 MARK2Q7KZI7 788 aaKnown RBP19.28■□□□□ 0.68
RPS28-202ENST00000449223 KCNMB4Q86W47 210 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 LRRC6Q86X45 466 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 LMNTD2Q8IXW0 634 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 UNC5BQ8IZJ1 945 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 SIX5Q8N196 739 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 OR4K2Q8NGD2 314 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 OR13C4Q8NGS5 318 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 CDKL2Q92772 493 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 SH3GL2Q99962 352 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 MFSD1Q9H3U5 465 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 CD320Q9NPF0 282 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 SMYD2Q9NRG4 433 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 POLR3BQ9NW08 1133 aaPredicted RBP19.28■□□□□ 0.68
RPS28-202ENST00000449223 PKP3Q9Y446 797 aa19.28■□□□□ 0.68
RPS28-202ENST00000449223 PSMD11O00231 422 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 STX7O15400 261 aaKnown RBP19.27■□□□□ 0.68
RPS28-202ENST00000449223 AP1G1O43747 822 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 VAPBO95292 243 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 CLDN7O95471 211 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 P2RY2P41231 377 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 ARSDP51689 593 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 PTPN5P54829 565 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 RALGDSQ12967 914 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 CRY1Q16526 586 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 PIP5KL1Q5T9C9 394 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 FBXL19Q6PCT2 694 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 SYT13Q7L8C5 426 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 TSPAN33Q86UF1 283 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 RIBC1Q8N443 379 aaPredicted RBP19.27■□□□□ 0.68
RPS28-202ENST00000449223 AADATQ8N5Z0 425 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 SLC44A1Q8WWI5 657 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 SCG3Q8WXD2 468 aaKnown RBP19.27■□□□□ 0.68
RPS28-202ENST00000449223 CDKN2AIPNLQ96HQ2 116 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 RUFY1Q96T51 708 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 C20orf96Q9NUD7 363 aaPredicted RBP19.27■□□□□ 0.68
RPS28-202ENST00000449223 NFKBIL1Q9UBC1 381 aaPredicted RBP19.27■□□□□ 0.68
RPS28-202ENST00000449223 MUTYHQ9UIF7 546 aa19.27■□□□□ 0.68
RPS28-202ENST00000449223 MID1O15344 667 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 CDH16O75309 829 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 XPAP23025 273 aaPredicted RBP19.26■□□□□ 0.67
RPS28-202ENST00000449223 STC1P52823 247 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 PTSQ03393 145 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 CCDC15Q0P6D6 951 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 AGBL4Q5VU57 503 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 ZDHHC20Q5W0Z9 365 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 TMEM92Q6UXU6 159 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 Q6ZS52 159 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 GALNT7Q86SF2 657 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 TMPRSS6Q8IU80 811 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 CALML6Q8TD86 181 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 DTX3LQ8TDB6 740 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 HDAC10Q969S8 669 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 CLDN23Q96B33 292 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 TBATAQ96M53 351 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 PAFAH2Q99487 392 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 LMAN1LQ9HAT1 526 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 NSMCE4AQ9NXX6 385 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 ZFATQ9P243 1243 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 GGT7Q9UJ14 662 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 ZNF180Q9UJW8 692 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 MTF2Q9Y483 593 aaPredicted RBP19.26■□□□□ 0.67
RPS28-202ENST00000449223 PLXNA2O75051 1894 aa19.26■□□□□ 0.67
RPS28-202ENST00000449223 CCDC78A2IDD5 438 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 RGSL1A5PLK6 1076 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 CXorf49A8MYA2 514 aaPredicted RBP19.25■□□□□ 0.67
RPS28-202ENST00000449223 RASGRF2O14827 1237 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 ATG13O75143 517 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 ERVK-10P10266 1014 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 FAM193AP78312 1265 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 PRAMEP78395 509 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 CNTN1Q12860 1018 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 EFTUD2Q15029 972 aaKnown RBP eCLIP19.25■□□□□ 0.671e-12■■■■□ 23.8
RPS28-202ENST00000449223 POM121L1PQ3SYA9 428 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 HSP90AA5PQ58FG0 334 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 CEP85LQ5SZL2 805 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 TEDDM1Q5T9Z0 273 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 ADGRD1Q6QNK2 874 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 SLC26A11Q86WA9 606 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 GPR150Q8NGU9 434 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 GABPB2Q8TAK5 448 aaPredicted RBP19.25■□□□□ 0.67
RPS28-202ENST00000449223 PLEKHG4BQ96PX9 1271 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 FAM167BQ9BTA0 163 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 CDH19Q9H159 772 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 LGALS13Q9UHV8 139 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 VCANP13611 3396 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms