RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ANP32BQ92688 251 aaKnown RBP14.62□□□□□ -0.07
USP39-206ENST00000448971 AGAP3Q96P47 875 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 IL12RB2Q99665 862 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 TDRD1Q9BXT4 1180 aaKnown RBP14.62□□□□□ -0.07
USP39-206ENST00000448971 PRORYQ9H606 182 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 ZNF462Q96JM2 2506 aa14.62□□□□□ -0.07
USP39-206ENST00000448971 POM121BA6NF01 834 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 APOC4-APOC2K7ER74 178 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 TLX3O43711 291 aaPredicted RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 ZIC2O95409 532 aaPredicted RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 LDOC1O95751 146 aaPredicted RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 APOC2P02655 101 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 PRB1P04280 392 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 PCCBP05166 539 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 ITGAVP06756 1048 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 C1SP09871 688 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 JUPP14923 745 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 CES1P23141 567 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 EPHA8P29322 1005 aaPredicted RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 VIPR1P32241 457 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 CD86P42081 329 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 ABCG1P45844 678 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 RABIFP47224 123 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 DNAJC3Q13217 504 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 PDE1CQ14123 709 aaPredicted RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 PRKD1Q15139 912 aaPredicted RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 IRF4Q15306 451 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 DENND2CQ68D51 928 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 KDM7AQ6ZMT4 941 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 Q6ZSR6 202 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 NDUFAF2Q8N183 169 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 SLC22A18ASQ8N1D0 253 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 RNF10Q8N5U6 811 aaKnown RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 TP53I13Q8NBR0 393 aaPredicted RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 LPCAT1Q8NF37 534 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 ARRDC2Q8TBH0 407 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 ALG3Q92685 438 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 LENG8Q96PV6 779 aaPredicted RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 ALS2CR12Q96Q35 445 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 UBL7Q96S82 380 aaPredicted RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 KLF6Q99612 283 aaPredicted RBP14.61□□□□□ -0.07
USP39-206ENST00000448971 OSBPL8Q9BZF1 889 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 LZTFL1Q9NQ48 299 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 PHTF1Q9UMS5 762 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 HS3ST3A1Q9Y663 406 aa14.61□□□□□ -0.07
USP39-206ENST00000448971 TK2O00142 265 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 SDC3O75056 442 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 C1QL1O75973 258 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 CDK4P11802 303 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 CTPS1P17812 591 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 PTPN7P35236 360 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 THOP1P52888 689 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 NIPAL4Q0D2K0 466 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 TARDBPQ13148 414 aaKnown RBP eCLIP14.6□□□□□ -0.07
USP39-206ENST00000448971 ZNF211Q13398 564 aaPredicted RBP14.6□□□□□ -0.07
USP39-206ENST00000448971 ARHGEF7Q14155 803 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 RTP5Q14D33 572 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 LRRC14Q15048 493 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 ACOX1Q15067 660 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 NOMO1Q15155 1222 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 FAM182AQ5T1J6 154 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 AADACL2Q6P093 401 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 LIPIQ6XZB0 460 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 PARGQ86W56 976 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 CNTD1Q8N815 330 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 SLC39A7Q92504 469 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 CNDP2Q96KP4 475 aaKnown RBP14.6□□□□□ -0.07
USP39-206ENST00000448971 BMFQ96LC9 184 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 QKIQ96PU8 341 aaKnown RBP eCLIP14.6□□□□□ -0.07
USP39-206ENST00000448971 ERVMER34-1Q9H9K5 563 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 KLHL8Q9P2G9 620 aaPredicted RBP14.6□□□□□ -0.07
USP39-206ENST00000448971 CHKBQ9Y259 395 aa14.6□□□□□ -0.07
USP39-206ENST00000448971 C2orf72A6NCS6 295 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 GOLGA6L9A6NEM1 432 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 NPIPB15A6NHN6 443 aaPredicted RBP14.59□□□□□ -0.07
USP39-206ENST00000448971 HACD1B0YJ81 288 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 H7C0C1 242 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 MTSS1O43312 755 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 RFPL3O75679 317 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 RECQL5O94762 991 aaPredicted RBP14.59□□□□□ -0.07
USP39-206ENST00000448971 TJP3O95049 919 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 PDHA1P08559 390 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 ALPIP09923 528 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 PYGMP11217 842 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 PTPN3P26045 913 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 ATP5OP48047 213 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 ACADVLP49748 655 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 PEX5P50542 639 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 OTUD4Q01804 1114 aaKnown RBP14.59□□□□□ -0.07
USP39-206ENST00000448971 C19orf57Q0VDD7 668 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 BNIP3Q12983 259 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 CNGA3Q16281 694 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 PCSK7Q16549 785 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 SEL1L2Q5TEA6 688 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 KANSL1Q7Z3B3 1105 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 DCP2Q8IU60 420 aaKnown RBP14.59□□□□□ -0.07
USP39-206ENST00000448971 CDKL3Q8IVW4 592 aaPredicted RBP14.59□□□□□ -0.07
USP39-206ENST00000448971 EID2Q8N6I1 236 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 CENPTQ96BT3 561 aa14.59□□□□□ -0.07
USP39-206ENST00000448971 NXPE2Q96DL1 559 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms