RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SOX1O00570 391 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 CLDN4O14493 209 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 LSM1O15116 133 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 TGFB1I1O43294 461 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 TSPAN6O43657 245 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 HMOX2P30519 316 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ALDH9A1P49189 494 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 RGS19P49795 217 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SMAD1Q15797 465 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 KHDRBS2Q5VWX1 349 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 PATL1Q86TB9 770 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 CACNA2D3Q8IZS8 1091 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 STK40Q8N2I9 435 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 OTUB1Q96FW1 271 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 KCNH6Q9H252 994 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 IRAK3Q9Y616 596 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 A0A0A6YYK5 440 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ERCC2P18074 760 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 TAF1P21675 1872 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ARHGAP25P42331 645 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 CLCN4P51793 760 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 CBWD6Q4V339 395 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 GDPD4Q6W3E5 623 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF598Q86UK7 904 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 DNAAF5Q86Y56 855 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 DCP2Q8IU60 420 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 FUKQ8N0W3 1084 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 OR2AP1Q8NGE2 309 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 OR2T34Q8NGX1 318 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF669Q96BR6 464 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 WDR92Q96MX6 357 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ASPSCR1Q9BZE9 553 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF334Q9HCZ1 680 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 CD274Q9NZQ7 290 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 FCF1Q9Y324 198 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 KDM3BQ7LBC6 1761 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 M0QZQ0 153 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 PRRG2O14669 202 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 WNT9AO14904 365 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF185O15231 689 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 FLRT2O43155 660 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ABCB7O75027 752 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 RFPL3O75679 317 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 GTF2A1P52655 376 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF143P52747 638 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 DSC1Q08554 894 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 COBLL1Q53SF7 1204 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 TAS1R1Q7RTX1 841 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 VSTM4Q8IW00 320 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 CEP97Q8IW35 865 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 OR10T2Q8NGX3 314 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 GPT2Q8TD30 523 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 APOL2Q9BQE5 337 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC46A2Q9BY10 475 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 GOLPH3Q9H4A6 298 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SYTL2Q9HCH5 934 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 UBP1Q9NZI7 540 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 HEBP2Q9Y5Z4 205 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 C2orf78A6NCI8 922 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 HYAL3O43820 417 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 RNGTTO60942 597 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 PAK4O96013 591 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SOAT1P35610 550 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SKIV2L2P42285 1042 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 MBTPS1Q14703 1052 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC9A5Q14940 896 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 OSTM1Q86WC4 334 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 RNF10Q8N5U6 811 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 AGBL5Q8NDL9 886 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 OR5M3Q8NGP4 307 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 TNFRSF25Q93038 417 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ERGIC2Q96RQ1 377 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ATG10Q9H0Y0 220 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 VPS11Q9H270 941 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC24A3Q9HC58 644 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 XAB2Q9HCS7 855 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 C20orf96Q9NUD7 363 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 GOLGA8TH3BQL2 631 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCNDBP1O95273 360 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 C4BPAP04003 597 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 MGAT3Q09327 533 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF211Q13398 564 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SRLQ86TD4 932 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 MCOLN2Q8IZK6 566 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF514Q96K75 400 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 LINC00597Q9H2U6 94 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 LRRC40Q9H9A6 602 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SIGLEC16A6NMB1 481 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 PRAMEF26H0Y7S4 382 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 GFRA2O00451 464 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 B4GAT1O43505 415 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZBTB14O43829 449 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 GMFGO60234 142 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 LATS1O95835 1130 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 KRT14P02533 472 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SRPRAP08240 638 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 SPINK2P20155 84 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 MIPP30301 263 aa5.64□□□□□ -1.51
CDC42BPA-209ENST00000448940 FOLR3P41439 243 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms