RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 Q6ZVL8 140 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 TMC3Q7Z5M5 1100 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 PCGF5Q86SE9 256 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 HOOK3Q86VS8 718 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 HORMAD1Q86X24 394 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 CBARPQ8N350 705 aaPredicted RBP11.86□□□□□ -0.51
RCL1-208ENST00000448872 SEC14L1Q92503 715 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 BIRC7Q96CA5 298 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 ZNF778Q96MU6 729 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 MYOCQ99972 504 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 FAM126AQ9BYI3 521 aaPredicted RBP11.86□□□□□ -0.51
RCL1-208ENST00000448872 GPR63Q9BZJ6 419 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 ZFYVE1Q9HBF4 777 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 FZD3Q9NPG1 666 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 SYBUQ9NX95 663 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 WHRNQ9P202 907 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 CD84Q9UIB8 345 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 CA5BQ9Y2D0 317 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.86□□□□□ -0.51
RCL1-208ENST00000448872 CKAP5Q14008 2032 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 MYO15AQ9UKN7 3530 aa11.86□□□□□ -0.51
RCL1-208ENST00000448872 WNT9AO14904 365 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 SLC31A1O15431 190 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 LDB2O43679 373 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 LZTS3O60299 673 aaPredicted RBP11.85□□□□□ -0.51
RCL1-208ENST00000448872 LILRB5O75023 590 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 RECQL5O94762 991 aaPredicted RBP11.85□□□□□ -0.51
RCL1-208ENST00000448872 MAOBP27338 520 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 MAGEA3P43357 314 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 RPS21P63220 83 aaKnown RBP11.85□□□□□ -0.51
RCL1-208ENST00000448872 CALCOCO2Q13137 446 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 ARHGEF7Q14155 803 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 LPAL2Q16609 132 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 SLC36A4Q6YBV0 504 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 TRIM69Q86WT6 500 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 PELI3Q8N2H9 469 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 OR13C4Q8NGS5 318 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 FBXO25Q8TCJ0 367 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 IFT81Q8WYA0 676 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 SNX19Q92543 992 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 ART4Q93070 314 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 COQ10AQ96MF6 247 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 HSPA12BQ96MM6 686 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 ORAI3Q9BRQ5 295 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 WDR83Q9BRX9 315 aaKnown RBP11.85□□□□□ -0.51
RCL1-208ENST00000448872 DUSP15Q9H1R2 295 aaPredicted RBP11.85□□□□□ -0.51
RCL1-208ENST00000448872 KDM4CQ9H3R0 1056 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 CHRAC1Q9NRG0 131 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 ZDHHC18Q9NUE0 388 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.85□□□□□ -0.51
RCL1-208ENST00000448872 SLC2A6Q9UGQ3 507 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 FNDC3AQ9Y2H6 1198 aaKnown RBP11.85□□□□□ -0.51
RCL1-208ENST00000448872 PCDHGA2Q9Y5H1 932 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 CUL9Q8IWT3 2517 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 SHROOM3Q8TF72 1996 aa11.85□□□□□ -0.51
RCL1-208ENST00000448872 VPS13AQ96RL7 3174 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 METTL12A8MUP2 240 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 LATO43561 262 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 TM7SF2O76062 418 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 ECHS1P30084 290 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 CARSP49589 748 aaKnown RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 ZNF140P52738 457 aaPredicted RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 DRG2P55039 364 aaKnown RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 SARNPP82979 210 aaKnown RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 TMPRSS15P98073 1019 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 DHX9Q08211 1270 aaKnown RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 TAF1AQ15573 450 aaPredicted RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 SMAD1Q15797 465 aaKnown RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 BBS9Q3SYG4 887 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 PLK5Q496M5 336 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 ALS2CLQ60I27 953 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 KIAA1161Q6NSJ0 714 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 NEK5Q6P3R8 708 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 CES3Q6UWW8 571 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 CEP68Q76N32 757 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 TECPR1Q7Z6L1 1165 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 IGDCC3Q8IVU1 814 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 BBOF1Q8ND07 529 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 CADM4Q8NFZ8 388 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 BRSK1Q8TDC3 778 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 SCAMP4Q969E2 229 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 DNAJC1Q96KC8 554 aaKnown RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 C1QTNF2Q9BXJ5 285 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 SLC17A9Q9BYT1 436 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 ANKZF1Q9H8Y5 726 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 XAB2Q9HCS7 855 aaKnown RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 GDF3Q9NR23 364 aa11.84□□□□□ -0.51
RCL1-208ENST00000448872 MBNL1Q9NR56 388 aaKnown RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 ATXN2Q99700 1313 aaKnown RBP11.84□□□□□ -0.51
RCL1-208ENST00000448872 MROH6A6NGR9 719 aa11.83□□□□□ -0.52
RCL1-208ENST00000448872 MEI4A8MW99 385 aa11.83□□□□□ -0.52
RCL1-208ENST00000448872 K7ESM1 405 aa11.83□□□□□ -0.52
RCL1-208ENST00000448872 GPR39O43194 453 aa11.83□□□□□ -0.52
RCL1-208ENST00000448872 MLNP12872 115 aa11.83□□□□□ -0.52
RCL1-208ENST00000448872 ZNF30P17039 623 aa11.83□□□□□ -0.52
RCL1-208ENST00000448872 BPIP17213 487 aa11.83□□□□□ -0.52
RCL1-208ENST00000448872 NFKBIAP25963 317 aa11.83□□□□□ -0.52
RCL1-208ENST00000448872 HMGCLP35914 325 aa11.83□□□□□ -0.52
RCL1-208ENST00000448872 NPY2RP49146 381 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms