RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SMPD3Q9NY59 655 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PCDHB12Q9Y5F1 795 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 IRAK3Q9Y616 596 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 KCNE2Q9Y6J6 123 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 FAM240BA0A1B0GVZ2 78 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 GSAPA4D1B5 854 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 SAGE2PA6NJ88 616 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 AP3D1O14617 1153 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 MAFO75444 373 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 FGRP09769 529 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TNFSF9P41273 254 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PSEN1P49768 467 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 AIF1P55008 147 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 IL18R1Q13478 541 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 DLG2Q15700 870 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 ZFP69Q49AA0 526 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PABPC1LQ4VXU2 614 aaKnown RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 XKR6Q5GH73 641 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 FBXL19Q6PCT2 694 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 CHPFQ8IZ52 775 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 HM13Q8TCT9 377 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 LRRN4Q8WUT4 740 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PIH1D2Q8WWB5 315 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 HTRA1Q92743 480 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 COL26A1Q96A83 441 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TLCD1Q96CP7 247 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 LINGO1Q96FE5 620 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 KREMEN1Q96MU8 473 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 SLC9A7Q96T83 725 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 P2RX7Q99572 595 aaKnown RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 SSU72Q9NP77 194 aaKnown RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 TRNAU1APQ9NX07 287 aaKnown RBP7.79□□□□□ -1.16
NEDD9-204ENST00000448183 LGALS13Q9UHV8 139 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PHF11Q9UIL8 331 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 ADGRB2O60241 1585 aa7.79□□□□□ -1.16
NEDD9-204ENST00000448183 PLK4O00444 970 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RGS10O43665 173 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 PSIP1O75475 530 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 MTRF1O75570 445 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 IPO13O94829 963 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 HIST1H2ABP04908 130 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 PIRTP0C851 137 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ACADMP11310 421 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 TCF4P15884 667 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ZNF24P17028 368 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 CTSKP43235 329 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 MRPS5P82675 430 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RALGDSQ12967 914 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ZNHIT3Q15649 155 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 GPAT3Q53EU6 434 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 AKIRIN2Q53H80 203 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 FKBP1CQ5VVH2 108 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 FAM131AQ6UXB0 335 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RNF19BQ6ZMZ0 732 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 HIST3H2AQ7L7L0 130 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 SPPL2CQ8IUH8 684 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 SLC34A3Q8N130 599 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 GPR156Q8NFN8 814 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 SPOCK2Q92563 424 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 HIST1H2ACQ93077 130 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ZNF607Q96SK3 696 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 LHX5Q9H2C1 402 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ZDHHC6Q9H6R6 413 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 POLR3HQ9Y535 204 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 PTCH2Q9Y6C5 1203 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 U3KQV3 271 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RICTORQ6R327 1708 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 IRGMA1A4Y4 181 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 C2orf71A6NGG8 1288 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 CHURC1-FNTBB4DL54 471 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 WWP2O00308 870 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ADSLP30566 484 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 SCNN1GP51170 649 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 GMFBP60983 142 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 MAXP61244 160 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 PFKPQ01813 784 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 C6orf52Q5T4I8 152 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 STRADAQ7RTN6 431 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 CPT1BQ92523 772 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RBM4BQ9BQ04 359 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RBM4Q9BWF3 364 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ATP13A3Q9H7F0 1226 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 NEK6Q9HC98 313 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 BPIFA1Q9NP55 256 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ZNF180Q9UJW8 692 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 MEGF6O75095 1541 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 COL3A1P02461 1466 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 MATN2O00339 956 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 CASKO14936 926 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RGL2O15211 777 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 GRIN3BO60391 1043 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 FADS2O95864 444 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 FTH1P02794 183 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 THRBP10828 461 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 POLR2EP19388 210 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 PRDX6P30041 224 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 TAF13Q15543 124 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 HKDC1Q2TB90 917 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms