RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 HGH1Q9BTY7 390 aa11.89□□□□□ -0.51
MSH6-204ENST00000445503 ZMYM5Q9UJ78 669 aa11.89□□□□□ -0.51
MSH6-204ENST00000445503 OAZ3Q9UMX2 235 aa11.89□□□□□ -0.51
MSH6-204ENST00000445503 THSD7AQ9UPZ6 1657 aa11.89□□□□□ -0.51
MSH6-204ENST00000445503 MAGEB3O15480 346 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 GUCA1CO95843 209 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 PRKCQQ04759 706 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 BFSP2Q13515 415 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 NR6A1Q15406 480 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 ATP6AP1LQ52LC2 224 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 PAQR9Q6ZVX9 377 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 CFAP52Q8N1V2 620 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 METTL25Q8N6Q8 603 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 FBXO30Q8TB52 745 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 KCTD13Q8WZ19 329 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 PSMG2Q969U7 264 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 ULK4Q96C45 1275 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 BPIFA1Q9NP55 256 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 ANAPC2Q9UJX6 822 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 BAG5Q9UL15 447 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 PTCH2Q9Y6C5 1203 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 BTBD19C9JJ37 291 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 EI24O14681 340 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 HTRA2O43464 458 aaPredicted RBP11.88□□□□□ -0.51
MSH6-204ENST00000445503 SLC5A3P53794 718 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 HPCAP84074 193 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 TWF1Q12792 350 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 ZBTB6Q15916 424 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 AASDHQ4L235 1098 aaPredicted RBP11.88□□□□□ -0.51
MSH6-204ENST00000445503 ABI1Q8IZP0 508 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 PARP8Q8N3A8 854 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 DDHD1Q8NEL9 900 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 GIPC3Q8TF64 312 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 GIPC2Q8TF65 315 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 ANKRD49Q8WVL7 239 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 CASP10Q92851 521 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 HMCESQ96FZ2 354 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 PPM1MQ96MI6 270 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 PPP1R2P1Q96PQ5 205 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 TMEM209Q96SK2 561 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 CYP2S1Q96SQ9 504 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 ADI1Q9BV57 179 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 DGCR6LQ9BY27 220 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 FAM8A1Q9UBU6 413 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 TRMT6Q9UJA5 497 aaKnown RBP11.88□□□□□ -0.51
MSH6-204ENST00000445503 PCDHGA7Q9Y5G6 932 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 LTBP1Q14766 1721 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 C7orf72A4D263 438 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 PPP6CO00743 305 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 FGF10O15520 208 aaPredicted RBP11.88□□□□□ -0.51
MSH6-204ENST00000445503 TBX18O95935 607 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 STT3AP46977 705 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 ACBD5Q5T8D3 534 aaPredicted RBP11.88□□□□□ -0.51
MSH6-204ENST00000445503 C14orf80Q86SX3 495 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 TNIP2Q8NFZ5 429 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 KCNN1Q92952 543 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 FBXO32Q969P5 355 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 GFM2Q969S9 779 aaKnown RBP11.88□□□□□ -0.51
MSH6-204ENST00000445503 FBXL20Q96IG2 436 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 NSUN5Q96P11 429 aaKnown RBP11.88□□□□□ -0.51
MSH6-204ENST00000445503 GJD2Q9UKL4 321 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 SLC8A2Q9UPR5 921 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 ORC6Q9Y5N6 252 aa11.88□□□□□ -0.51
MSH6-204ENST00000445503 VILLO15195 856 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 CD3EAPO15446 510 aaKnown RBP11.87□□□□□ -0.51
MSH6-204ENST00000445503 GPR32O75388 356 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 FYNP06241 537 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 CHRNB3Q05901 458 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 RABL3Q5HYI8 236 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 KIAA0930Q6ICG6 404 aaPredicted RBP11.87□□□□□ -0.51
MSH6-204ENST00000445503 OR13C4Q8NGS5 318 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 PLEKHG4BQ96PX9 1271 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 CXorf21Q9HAI6 301 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 SCN1AP35498 2009 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 PPP1R8Q12972 351 aaKnown RBP11.87□□□□□ -0.51
MSH6-204ENST00000445503 ACAP2Q15057 778 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 LDLRAP1Q5SW96 308 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 KIAA0319Q5VV43 1072 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 TMEM214Q6NUQ4 689 aaKnown RBP11.87□□□□□ -0.51
MSH6-204ENST00000445503 CCDC81Q6ZN84 652 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 CLEC14AQ86T13 490 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 METTL6Q8TCB7 284 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 ACOX2Q99424 681 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 KATNAL1Q9BW62 490 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 CATSPERZQ9NTU4 200 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 TAS2R13Q9NYV9 303 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 SUCOQ9UBS9 1254 aaKnown RBP11.87□□□□□ -0.51
MSH6-204ENST00000445503 ARL5AQ9Y689 179 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 TFPTP0C1Z6 253 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 SMIM18P0DKX4 95 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 PCSK6P29122 969 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 CD52P31358 61 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 OCA2Q04671 838 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 GRB7Q14451 532 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 PTPRNQ16849 979 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 ZNF792Q3KQV3 632 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 C9orf131Q5VYM1 1079 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 PATL1Q86TB9 770 aaKnown RBP11.87□□□□□ -0.51
MSH6-204ENST00000445503 FAM126BQ8IXS8 530 aa11.87□□□□□ -0.51
MSH6-204ENST00000445503 DRAXINQ8NBI3 349 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms