RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 NPHS1O60500 1241 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 CCDC166P0CW27 439 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 GJA1P17302 382 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 PMLP29590 882 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 PGGT1BP53609 377 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 PFKPQ01813 784 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 LMAN2Q12907 356 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 RIPK1Q13546 671 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 SEMA3AQ14563 771 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 ATG14Q6ZNE5 492 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 KIF2BQ8N4N8 673 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 TTC30BQ8N4P2 665 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 ABCB8Q9NUT2 735 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 ARL8BQ9NVJ2 186 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 ZMYM5Q9UJ78 669 aa18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.88■□□□□ 0.61
SEMA3D-202ENST00000444867 C5orf67F2Z3F1 127 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 SLCO1B7G3V0H7 640 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 ZNF195O14628 629 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 KRT16P08779 473 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 HNRNPA1P09651 372 aaKnown RBP eCLIP18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 CCR2P41597 374 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 CDKN2DP55273 166 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 PRKAA1Q13131 559 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 TUBB3Q13509 450 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 PLEKHG6Q3KR16 790 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 ARMC12Q5T9G4 340 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 PIWIL4Q7Z3Z4 852 aaKnown RBP18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 PARP9Q8IXQ6 854 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 CMTM8Q8IZV2 173 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 ZNF557Q8N988 423 aaPredicted RBP18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 TTC16Q8NEE8 873 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 SH3RF2Q8TEC5 729 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 MYO19Q96H55 970 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 AARSD1Q9BTE6 412 aaKnown RBP18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 TLE6Q9H808 572 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 MAGEE1Q9HCI5 957 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 CRYL1Q9Y2S2 319 aa18.87■□□□□ 0.61
SEMA3D-202ENST00000444867 CAPN14A8MX76 684 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 NRG2O14511 850 aaPredicted RBP18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 STX7O15400 261 aaKnown RBP18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 SOCS5O75159 536 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 PGLSO95336 258 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 IGSF6O95976 241 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 HNRNPH1P31943 449 aaKnown RBP18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 IDH3AP50213 366 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 EPHB1P54762 984 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 CFAP157Q5JU67 520 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 ATXN7L2Q5T6C5 722 aaPredicted RBP18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 ZNF549Q6P9A3 640 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 SLC22A9Q8IVM8 553 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 ZNF781Q8N8C0 355 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 BHMTQ93088 406 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 EBF4Q9BQW3 602 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 MAN1C1Q9NR34 630 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 HCFC1R1Q9NWW0 138 aa18.86■□□□□ 0.61
SEMA3D-202ENST00000444867 LINC01553A4QN01 128 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 F8W8V4 182 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 XYLBO75191 536 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 NDUFS3O75489 264 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 MT-CO1P00395 513 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 PENKP01210 267 aaPredicted RBP18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 RB1P06400 928 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 ESRRAP11474 423 aaPredicted RBP18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 ABL2P42684 1182 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 NAGLUP54802 743 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 AARS2Q5JTZ9 985 aaKnown RBP18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 TPGS1Q6ZTW0 290 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 MAVSQ7Z434 540 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 TTC7BQ86TV6 843 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 EFHBQ8N7U6 833 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 PRR11Q96HE9 360 aaPredicted RBP18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 LMLNQ96KR4 655 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 CCDC106Q9BWC9 280 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 POLR3BQ9NW08 1133 aaPredicted RBP18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 NCKIPSDQ9NZQ3 722 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 VTI1BQ9UEU0 232 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 PCDHB9Q9Y5E1 797 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 HTRA2O43464 458 aaPredicted RBP18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 MOSPD3O75425 235 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 POU2F2P09086 479 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 SLC8A1P32418 973 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 TTPAP49638 278 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 RPL14P50914 215 aaKnown RBP18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 BCL2L1Q07817 233 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 TEAD2Q15562 447 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 EPGNQ6UW88 154 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 SPATA6LQ8N4H0 392 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 MICAL1Q8TDZ2 1067 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 LPGAT1Q92604 370 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 ISG20Q96AZ6 181 aaKnown RBP18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 CNDP1Q96KN2 507 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 BTBD10Q9BSF8 475 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 CCDC68Q9H2F9 335 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 SYTL2Q9HCH5 934 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 PLK2Q9NYY3 685 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 ZNF711Q9Y462 761 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 COMMD10Q9Y6G5 202 aa18.85■□□□□ 0.61
SEMA3D-202ENST00000444867 ZNF106Q9H2Y7 1883 aaKnown RBP18.84■□□□□ 0.61
SEMA3D-202ENST00000444867 PIGNO95427 931 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms