RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 DNAAF3Q8N9W5 541 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 TMEM145Q8NBT3 493 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 BLOC1S5Q8TDH9 187 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 TRIB3Q96RU7 358 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 EDEM2Q9BV94 578 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 TRPM6Q9BX84 2022 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 CDH19Q9H159 772 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 SMOC1Q9H4F8 434 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 PKP3Q9Y446 797 aa14.11□□□□□ -0.15
SSBP3-208ENST00000444533 RALGAPA1Q6GYQ0 2036 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 A0A1B0GVT2 93 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 C2orf81A6NN90 581 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 PATE3B3GLJ2 98 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 PDE2AO00408 941 aaPredicted RBP14.1□□□□□ -0.15
SSBP3-208ENST00000444533 CLDN7O95471 211 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 METTL18O95568 372 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 CRTAMO95727 393 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 AP2A1O95782 977 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 AGTP01019 485 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 APRTP07741 180 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 THEGLP0DJG4 465 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 SDHBP21912 280 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 KELP23276 732 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 ARRB1P49407 418 aaPredicted RBP14.1□□□□□ -0.15
SSBP3-208ENST00000444533 YPEL5P62699 121 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 CKAP4Q07065 602 aaKnown RBP14.1□□□□□ -0.15
SSBP3-208ENST00000444533 GRIK2Q13002 908 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 MTM1Q13496 603 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 LAMB3Q13751 1172 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 FAM182AQ5T1J6 154 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 FAXCQ5TGI0 409 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 Q6ZSR6 202 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 TSPAN33Q86UF1 283 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 KIAA2013Q8IYS2 634 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 TAB3Q8N5C8 712 aaPredicted RBP14.1□□□□□ -0.15
SSBP3-208ENST00000444533 C1orf216Q8TAB5 229 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 CENPTQ96BT3 561 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 DTD2Q96FN9 168 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 EBF2Q9HAK2 575 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 ETNK1Q9HBU6 452 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 CAPN10Q9HC96 672 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 TMEM9BQ9NQ34 198 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.1□□□□□ -0.15
SSBP3-208ENST00000444533 SHOC2Q9UQ13 582 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 ZNF711Q9Y462 761 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 GON4LQ3T8J9 2241 aa14.1□□□□□ -0.15
SSBP3-208ENST00000444533 LNP1A1A4G5 178 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 GOLGA8CPA6NN73 597 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 C10orf142B7Z368 130 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 CACNB4O00305 520 aaPredicted RBP14.09□□□□□ -0.15
SSBP3-208ENST00000444533 YKT6O15498 198 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 PPFIA2O75334 1257 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 KRT14P02533 472 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 PIRTP0C851 137 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 TSHRP16473 764 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 LHCGRP22888 699 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 ETV3P41162 512 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 STC1P52823 247 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 CLDN2P57739 230 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 PTSQ03393 145 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 TUBB2AQ13885 445 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 FGL2Q14314 439 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 IHHQ14623 411 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 SUZ12Q15022 739 aaKnown RBP14.09□□□□□ -0.15
SSBP3-208ENST00000444533 IRF4Q15306 451 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 WSCD2Q2TBF2 565 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 RAET1GQ6H3X3 334 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 TCEAL6Q6IPX3 200 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 RANBP10Q6VN20 620 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 NYAP1Q6ZVC0 841 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 SYDE1Q6ZW31 735 aaPredicted RBP14.09□□□□□ -0.15
SSBP3-208ENST00000444533 LYSMD3Q7Z3D4 306 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 HSD11B1LQ7Z5J1 315 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 ABI3BPQ7Z7G0 1075 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 CREG2Q8IUH2 290 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 PDCD7Q8N8D1 485 aaKnown RBP14.09□□□□□ -0.15
SSBP3-208ENST00000444533 TCEAL3Q969E4 200 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 AP2M1Q96CW1 435 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 COQ10AQ96MF6 247 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 APOL2Q9BQE5 337 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 ORAI3Q9BRQ5 295 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 TUBB2BQ9BVA1 445 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 WDR26Q9H7D7 661 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 SMARCAL1Q9NZC9 954 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 VPS13AQ96RL7 3174 aa14.09□□□□□ -0.15
SSBP3-208ENST00000444533 A0A1W2PR77 199 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 H3BM21 787 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 RAD51BO15315 384 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 URI1O94763 535 aaPredicted RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 ATXN1LP0C7T5 689 aaKnown RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 ETS1P14921 441 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 RPL22P35268 128 aaKnown RBP14.08□□□□□ -0.16
SSBP3-208ENST00000444533 CHRNA4P43681 627 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 GPR1P46091 355 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 VPS41P49754 854 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 CDK16Q00536 496 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 CDH17Q12864 832 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 GPS1Q13098 491 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 SEMA5AQ13591 1074 aa14.08□□□□□ -0.16
SSBP3-208ENST00000444533 PDE1CQ14123 709 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms