RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 LYSMD1Q96S90 227 aa17.47■□□□□ 0.39
SMARCAL1-209ENST00000444508 GBA3Q9H227 469 aa17.47■□□□□ 0.39
SMARCAL1-209ENST00000444508 GPR27Q9NS67 375 aa17.47■□□□□ 0.39
SMARCAL1-209ENST00000444508 JRKLQ9Y4A0 524 aa17.47■□□□□ 0.39
SMARCAL1-209ENST00000444508 C1orf232A0A0U1RR37 186 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 SH3BP5O60239 455 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 NDST3O95803 873 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 ITGAVP06756 1048 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 GM2AP17900 193 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 EPHA8P29322 1005 aaPredicted RBP17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 GEMP55040 296 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 WNT3AP56704 352 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 MPP3Q13368 585 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 PRPSAP1Q14558 356 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 INPP5AQ14642 412 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 ZNF569Q5MCW4 686 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 KDM7AQ6ZMT4 941 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 PIP4P1Q86T03 277 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 FAM71DQ8N9W8 422 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 DEFB124Q8NES8 71 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 CCHCR1Q8TD31 782 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 DTD2Q96FN9 168 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 PPP1R2P1Q96PQ5 205 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 SRPK1Q96SB4 655 aaKnown RBP17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 FSD1LQ9BXM9 530 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 USP29Q9HBJ7 922 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 DNAJC28Q9NX36 388 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 DNAH14Q0VDD8 3507 aa17.46■□□□□ 0.39
SMARCAL1-209ENST00000444508 CACNA1AO00555 2505 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 GOLGA6CA6NDK9 693 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 GOLGA6BA6NDN3 693 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 C5orf60A6NFR6 353 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 CACNB4O00305 520 aaPredicted RBP17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 ENC1O14682 589 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 CEP104O60308 925 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 KCNK5O95279 499 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 EPOP01588 193 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 GOLGA6DP0CG33 693 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 CEACAM1P13688 526 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 HTR1BP28222 390 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 GRK6P43250 576 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 PTSQ03393 145 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 FZD2Q14332 565 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 SHBQ15464 509 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 PPM1JQ5JR12 505 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 PSAPL1Q6NUJ1 521 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 ESRP1Q6NXG1 681 aaKnown RBP17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 KDELC1Q6UW63 502 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 MACC1Q6ZN28 852 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 ARHGEF18Q6ZSZ5 1173 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 Q6ZVL8 140 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 GATAD2AQ86YP4 633 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 CBARPQ8N350 705 aaPredicted RBP17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 IPMKQ8NFU5 416 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 ATL2Q8NHH9 583 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 CCDC110Q8TBZ0 833 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 SAP25Q8TEE9 199 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 MAIP1Q8WWC4 291 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 ATG4AQ8WYN0 398 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 OXNAD1Q96HP4 312 aaPredicted RBP17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 TMEM121Q9BTD3 319 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 APOOQ9BUR5 198 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 GOLGA6AQ9NYA3 693 aa17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 AAR2Q9Y312 384 aaKnown RBP17.45■□□□□ 0.38
SMARCAL1-209ENST00000444508 A0A0U1RQS6 177 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 H3BM21 787 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 LIASO43766 372 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 CLDN7O95471 211 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 FGGP02679 453 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 TSHRP16473 764 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 PSMB4P28070 264 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 CXCR5P32302 372 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 STC1P52823 247 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 NFATC4Q14934 902 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 TPRG1LQ5T0D9 272 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 PNCKQ6P2M8 343 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 DBX2Q6ZNG2 339 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 TECPR1Q7Z6L1 1165 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 RAVER1Q8IY67 606 aaKnown RBP17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 PLA2G15Q8NCC3 412 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 RHBDD1Q8TEB9 315 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 C1orf54Q8WWF1 131 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 LRRC45Q96CN5 670 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 MRGPRX2Q96LB1 330 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 WDR26Q9H7D7 661 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 MAGEE1Q9HCI5 957 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 ZNF148Q9UQR1 794 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 OR1A2Q9Y585 309 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 DCHS1Q96JQ0 3298 aa17.44■□□□□ 0.38
SMARCAL1-209ENST00000444508 LOC285095A0A1B0GVY8 99 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 SDC3O75056 442 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 CSF2P04141 144 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 C1SP09871 688 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 NME1P15531 152 aaKnown RBP17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 HLA-DPA1P20036 260 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 KELP23276 732 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 STIP1P31948 543 aaKnown RBP17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 HNRNPKP61978 463 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 BNIP3Q12983 259 aa17.43■□□□□ 0.38
SMARCAL1-209ENST00000444508 LONRF2Q1L5Z9 754 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms