RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 CTCFP49711 727 aaPredicted RBP4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 ILF3Q12906 894 aaKnown RBP eCLIP4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 ZBTB17Q13105 803 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 NAE1Q13564 534 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 C9orf50Q5SZB4 431 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 FAM122CQ6P4D5 195 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 NAGSQ8N159 534 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 POC1AQ8NBT0 407 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 PPM1EQ8WY54 764 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 DNASE2BQ8WZ79 361 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 RRP36Q96EU6 259 aaKnown RBP4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 TMEM19Q96HH6 336 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 AGXT2Q9BYV1 514 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 VPS33BQ9H267 617 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 NDST4Q9H3R1 872 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 ERVK-11Q9UQG0 969 aa4.35□□□□□ -1.71
AC003001.1-201ENST00000443247 A0A087WYN8 130 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 A0A0G2JPF8 293 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 A6NLC8 198 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 LRRC53A6NM62 1247 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 HNRNPCL3B7ZW38 293 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 USP17L23D6RBM5 183 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 HNRNPCL1O60812 293 aaKnown RBP4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 KRT36O76013 467 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 HNRNPCL4P0DMR1 293 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 CDAP32320 146 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 METAP2P50579 478 aaKnown RBP eCLIP4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 ZRSR1Q15695 479 aaKnown RBP4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 ALG11Q2TAA5 492 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 COL28A1Q2UY09 1125 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 KRBA2Q6ZNG9 492 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 TUBA1AQ71U36 451 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 SFR1Q86XK3 245 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 SPATA6LQ8N4H0 392 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 WFIKKN2Q8TEU8 576 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 FIG4Q92562 907 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 ZUFSPQ96AP4 578 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 SAAL1Q96ER3 474 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 TUBA1CQ9BQE3 449 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 EIF2AK1Q9BQI3 630 aaKnown RBP4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 SPRY4Q9C004 299 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 KCNN2Q9H2S1 579 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 PPP1R3EQ9H7J1 279 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 EVA1AQ9H8M9 152 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 EBF2Q9HAK2 575 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 HINT3Q9NQE9 182 aaKnown RBP4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 SLC6A13Q9NSD5 602 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 TXLNGQ9NUQ3 528 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 GTF2A1LQ9UNN4 478 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 NAALADL1Q9UQQ1 740 aa4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 AAR2Q9Y312 384 aaKnown RBP4.34□□□□□ -1.71
AC003001.1-201ENST00000443247 ZNF587BE7ETH6 402 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 NPHP1O15259 732 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 AGR2O95994 175 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 IGKV3-20P01619 116 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 HOXB5P09067 269 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 AMD1P17707 334 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 DGKAP23743 735 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 EPHA8P29322 1005 aaPredicted RBP4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 DDIT3P35638 169 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 CPOXP36551 454 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 HARS2P49590 506 aaKnown RBP4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 CLCNKAP51800 687 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 RAD23BP54727 409 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 HYAL1Q12794 435 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 FGFBP1Q14512 234 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 RGMBQ6NW40 437 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 METTL2BQ6P1Q9 378 aaKnown RBP4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 KCTD18Q6PI47 426 aaPredicted RBP4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 ZNF771Q7L3S4 317 aaPredicted RBP4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 HAPLN4Q86UW8 402 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 SATL1Q86VE3 508 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 EXOC3L1Q86VI1 746 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 ARMC8Q8IUR7 673 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 CHERPQ8IWX8 916 aaKnown RBP4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 ODF3L1Q8IXM7 274 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 OR2AK2Q8NG84 335 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 METTL2AQ96IZ6 378 aaKnown RBP4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 SLC41A2Q96JW4 573 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 INPP4AQ96PE3 977 aaPredicted RBP4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 NR1H4Q96RI1 486 aaPredicted RBP4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 FAM110AQ9BQ89 295 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 UBTD1Q9HAC8 227 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 BRF2Q9HAW0 419 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 LRRC4Q9HBW1 653 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 UBN1Q9NPG3 1134 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 TCF7L2Q9NQB0 619 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 PCDHB16Q9NRJ7 776 aa4.33□□□□□ -1.72
AC003001.1-201ENST00000443247 UTYO14607 1347 aa4.32□□□□□ -1.72
AC003001.1-201ENST00000443247 AKR1B15C9JRZ8 316 aaPredicted RBP4.32□□□□□ -1.72
AC003001.1-201ENST00000443247 FTCDO95954 541 aa4.32□□□□□ -1.72
AC003001.1-201ENST00000443247 DDX5P17844 614 aaKnown RBP4.32□□□□□ -1.72
AC003001.1-201ENST00000443247 MT3P25713 68 aa4.32□□□□□ -1.72
AC003001.1-201ENST00000443247 HNRNPH2P55795 449 aaKnown RBP4.32□□□□□ -1.72
AC003001.1-201ENST00000443247 EIF3BP55884 814 aaKnown RBP4.32□□□□□ -1.72
AC003001.1-201ENST00000443247 SLC20A2Q08357 652 aa4.32□□□□□ -1.72
AC003001.1-201ENST00000443247 ACSM2AQ08AH3 577 aa4.32□□□□□ -1.72
AC003001.1-201ENST00000443247 GSTA3Q16772 222 aa4.32□□□□□ -1.72
AC003001.1-201ENST00000443247 GGNBP1Q5YKI7 109 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms