RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CD248Q9HCU0 757 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 TM9SF3Q9HD45 589 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 CD93Q9NPY3 652 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 USP36Q9P275 1121 aaKnown RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 CTTNBP2NLQ9P2B4 639 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 HESX1Q9UBX0 185 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 DNAI1Q9UI46 699 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 GPR160Q9UJ42 338 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 MAGED2Q9UNF1 606 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-206ENST00000441089 HYOU1Q9Y4L1 999 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 PCDHB1Q9Y5F3 818 aa4.9□□□□□ -1.63
PTPN4-206ENST00000441089 ACANP16112 2415 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 SHISA3A0PJX4 238 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 FITM1A5D6W6 292 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 GOLGA6L9A6NEM1 432 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 TMEM191CA6NGB0 347 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 TMEM110-MUSTN1A8MSY1 372 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 F8VP50 259 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 GOLGA8SH3BPF8 625 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 GRAP2O75791 330 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 DDAH2O95865 285 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 FTCDO95954 541 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 IGLV3-19P01714 112 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 ATP1A1P05023 1023 aaKnown RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 FYNP06241 537 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 MYBL1P10243 752 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 HAPLN1P10915 354 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 ACADMP11310 421 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 LCP1P13796 627 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 CD27P26842 260 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 NOP2P46087 812 aaKnown RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 TPMTP51580 245 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 RPL10AP62906 217 aaKnown RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 RNF4P78317 190 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 TSPY1Q01534 308 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 GAD2Q05329 585 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 ADIGQ0VDE8 80 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 E2F5Q15329 346 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 MAPRE1Q15691 268 aaKnown RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 DDR2Q16832 855 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 CFAP221Q4G0U5 840 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 RAB41Q5JT25 222 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 OTUD1Q5VV17 481 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 OR6B2Q6IFH4 312 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 DNAJC24Q6P3W2 148 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 RHBDF2Q6PJF5 856 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 SLFN11Q7Z7L1 901 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 NT5DC3Q86UY8 548 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 PTRH1Q86Y79 214 aaKnown RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 SPATA2LQ8IUW3 424 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 RHOT2Q8IXI1 618 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 DCP1BQ8IZD4 617 aaKnown RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 OXR1Q8N573 874 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 RNF10Q8N5U6 811 aaKnown RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 ARFGAP1Q8N6T3 406 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 EMC1Q8N766 993 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 ARL14EPQ8N8R7 260 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 TERB1Q8NA31 727 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 C3orf20Q8ND61 904 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 SCAMP5Q8TAC9 235 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 SAP25Q8TEE9 199 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 KCTD13Q8WZ19 329 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 OTUB2Q96DC9 234 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 C18orf8Q96DM3 657 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 SMARCD1Q96GM5 515 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 HSFY1Q96LI6 401 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 SLC46A1Q96NT5 459 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 MCEEQ96PE7 176 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 NOX5Q96PH1 765 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 SLC22A12Q96S37 553 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 CYP2S1Q96SQ9 504 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 TLR10Q9BXR5 811 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 ULBP1Q9BZM6 244 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 UBXN6Q9BZV1 441 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 MIS12Q9H081 205 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 CNTD2Q9H8S5 307 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 DMAP1Q9NPF5 467 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 LUC7LQ9NQ29 371 aaKnown RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 ST7Q9NRC1 585 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 METTL5Q9NRN9 209 aaKnown RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 TBC1D14Q9P2M4 693 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 UVRAGQ9P2Y5 699 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 GGT7Q9UJ14 662 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 TUBD1Q9UJT1 453 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 ANAPC7Q9UJX3 599 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 PACSIN2Q9UNF0 486 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-206ENST00000441089 CEP83Q9Y592 693 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 PCDHGA8Q9Y5G5 932 aa4.89□□□□□ -1.63
PTPN4-206ENST00000441089 C2CD4BA6NLJ0 364 aa4.88□□□□□ -1.63
PTPN4-206ENST00000441089 SIGLEC16A6NMB1 481 aa4.88□□□□□ -1.63
PTPN4-206ENST00000441089 YJEFN3A6XGL0 299 aa4.88□□□□□ -1.63
PTPN4-206ENST00000441089 CDRT15L2A8MXV6 281 aa4.88□□□□□ -1.63
PTPN4-206ENST00000441089 E7ENQ6 273 aa4.88□□□□□ -1.63
PTPN4-206ENST00000441089 LEFTY2O00292 366 aa4.88□□□□□ -1.63
PTPN4-206ENST00000441089 NPC1O15118 1278 aa4.88□□□□□ -1.63
PTPN4-206ENST00000441089 VILLO15195 856 aa4.88□□□□□ -1.63
PTPN4-206ENST00000441089 KIF5CO60282 957 aa4.88□□□□□ -1.63
PTPN4-206ENST00000441089 SRGAP2O75044 1071 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms