RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 IFI16Q16666 785 aaKnown RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 EMBQ6PCB8 327 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 Q6ZSR6 202 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 FAM183BPQ6ZVS7 135 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 CREG2Q8IUH2 290 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 FAM71AQ8IYT1 594 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 WDTC1Q8N5D0 677 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ZNF548Q8NEK5 533 aaPredicted RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 OR13H1Q8NG92 308 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 IFI44Q8TCB0 444 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ZFAND2BQ8WV99 257 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 C18orf8Q96DM3 657 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ATP6V1G3Q96LB4 118 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 STK33Q9BYT3 514 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 STRADBQ9C0K7 418 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 PCMTD2Q9NV79 361 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 NOP53Q9NZM5 478 aaKnown RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 AIPL1Q9NZN9 384 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 MFHAS1Q9Y4C4 1052 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 WASF2Q9Y6W5 498 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 IGSF10Q6WRI0 2623 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ZFYVE26Q68DK2 2539 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 LAMA1P25391 3075 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 RCCD1A6NED2 376 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 PIK3R2O00459 728 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 USP12O75317 370 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ZMPSTE24O75844 475 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 POP4O95707 220 aaKnown RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ITGA2BP08514 1039 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 HOXC4P09017 264 aaPredicted RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 EIF4A3P38919 411 aaKnown RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 CXADRP78310 365 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 DEUP1Q05D60 604 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 PEX6Q13608 980 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 FZD2Q14332 565 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 POLD3Q15054 466 aaPredicted RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 TAF1BQ53T94 588 aaPredicted RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ZNF805Q5CZA5 627 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ESRP1Q6NXG1 681 aaKnown RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 PPP1R2P3Q6NXS1 205 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 TRIM72Q6ZMU5 477 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 MACC1Q6ZN28 852 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 TTC9Q92623 222 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 SLC46A1Q96NT5 459 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 IL12RB2Q99665 862 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 SEMA3CQ99985 751 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 BRINP2Q9C0B6 783 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 TKTL2Q9H0I9 626 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 OCEL1Q9H607 264 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 DNAJC12Q9UKB3 198 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ZFR2Q9UPR6 939 aaKnown RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 FRYQ5TBA9 3013 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 KNTC1P50748 2209 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 LY6G6EA0A0G2JKS1 128 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 K7ENP7 123 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 SLC31A1O15431 190 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 CTSLP07711 333 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 VAV1P15498 845 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 RHOQP17081 205 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 SLC9A1P19634 815 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 OR1E1P30953 314 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 MAT2AP31153 395 aaKnown RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 SOX5P35711 763 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 MAGEA1P43355 309 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 SULT1E1P49888 294 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 VAV2P52735 878 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 YBEYP58557 167 aaPredicted RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 GNA12Q03113 381 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ELP6Q0PNE2 266 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 EIF2B5Q13144 721 aaKnown RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 SLMAPQ14BN4 828 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ELOCQ15369 112 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 GLE1Q53GS7 698 aaKnown RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 INO80DQ53TQ3 878 aaPredicted RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ARSIQ5FYB1 569 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 CCDC122Q5T0U0 273 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 C6orf132Q5T0Z8 1188 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 INO80CQ6PI98 192 aaPredicted RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 STRADAQ7RTN6 431 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 PTAR1Q7Z6K3 402 aaPredicted RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 TBC1D1Q86TI0 1168 aaPredicted RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 CACNA2D3Q8IZS8 1091 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 TEKT4Q8WW24 435 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 VCPIP1Q96JH7 1222 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 BMFQ96LC9 184 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 TMEM74Q96NL1 305 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 YIPF2Q9BWQ6 316 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 CALN1Q9BXU9 219 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 CPEB1Q9BZB8 566 aaKnown RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 FAM117AQ9C073 453 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 LACRTQ9GZZ8 138 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ATP13A1Q9HD20 1204 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 TMEM248Q9NWD8 314 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 DNAJC28Q9NX36 388 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ZNF212Q9UDV6 495 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 ATXN7L1Q9ULK2 861 aaPredicted RBP6.07□□□□□ -1.44
PTPRR-204ENST00000440835 DUSP10Q9Y6W6 482 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 U3KQA8 63 aa6.07□□□□□ -1.44
PTPRR-204ENST00000440835 TRPM6Q9BX84 2022 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms