RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 PHACTR4Q8IZ21 702 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 SYCE1Q8N0S2 351 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 RBFAQ8N0V3 343 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 PELI3Q8N2H9 469 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 BTN2A2Q8WVV5 523 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 DTD2Q96FN9 168 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 TCEAL2Q9H3H9 227 aaPredicted RBP23.66■■□□□ 1.38
VARS-217ENST00000440048 GLOD4Q9HC38 313 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 EFR3BQ9Y2G0 817 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 NEUROG3Q9Y4Z2 214 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 LRP4O75096 1905 aa23.66■■□□□ 1.38
VARS-217ENST00000440048 KNTC1P50748 2209 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 NEMP2A6NFY4 417 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 CAPN8A6NHC0 703 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 APOC4-APOC2K7ER74 178 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 K7ESM1 405 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 SCAMP1O15126 338 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 APOC2P02655 101 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 HTR1BP28222 390 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 WASHC5Q12768 1159 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 ST3GAL2Q16842 350 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 PROX2Q3B8N5 592 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 CCDC157Q569K6 752 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 LRRC66Q68CR7 880 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 AADACL2Q6P093 401 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 PNCKQ6P2M8 343 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 ENPP7Q6UWV6 458 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 Q6ZVL8 140 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 FUBP1Q96AE4 644 aaKnown RBP23.65■■□□□ 1.38
VARS-217ENST00000440048 TEKT5Q96M29 485 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 QKIQ96PU8 341 aaKnown RBP eCLIP23.65■■□□□ 1.38
VARS-217ENST00000440048 KCTD5Q9NXV2 234 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 APOBEC3BQ9UH17 382 aaKnown RBP23.65■■□□□ 1.38
VARS-217ENST00000440048 KLK13Q9UKR3 277 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 CSNK1G3Q9Y6M4 447 aa23.65■■□□□ 1.38
VARS-217ENST00000440048 HACD1B0YJ81 288 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 ARHGAP6O43182 974 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 MTSS1O43312 755 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 AQP9O43315 295 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 FTCDO95954 541 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 PYGMP11217 842 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 TRIM23P36406 574 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 PPARDQ03181 441 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 PTSQ03393 145 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 QPCTQ16769 361 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 ALG11Q2TAA5 492 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 FAXCQ5TGI0 409 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 CCDC181Q5TID7 509 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 RFLNAQ6ZTI6 216 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 NYAP1Q6ZVC0 841 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 TECPR1Q7Z6L1 1165 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 CCDC112Q8NEF3 446 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 LMX1AQ8TE12 382 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 TSACCQ96A04 125 aaPredicted RBP23.64■■□□□ 1.37
VARS-217ENST00000440048 TADA1Q96BN2 335 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 WDR92Q96MX6 357 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 NLGN3Q9NZ94 848 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 SPASTQ9UBP0 616 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 PACSIN2Q9UNF0 486 aaPredicted RBP23.64■■□□□ 1.37
VARS-217ENST00000440048 CAPN6Q9Y6Q1 641 aa23.64■■□□□ 1.37
VARS-217ENST00000440048 HOXC4P09017 264 aaPredicted RBP23.63■■□□□ 1.37
VARS-217ENST00000440048 ALPPL2P10696 532 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 ZNF30P17039 623 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 CKMT2P17540 419 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 CETN2P41208 172 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 ACADVLP49748 655 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 KIAA1024LP59773 190 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 XRCC4Q13426 336 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 NOMO1Q15155 1222 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 HS1BP3Q53T59 392 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 PRRT3Q5FWE3 981 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 HID1Q8IV36 788 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 RNF10Q8N5U6 811 aaKnown RBP23.63■■□□□ 1.37
VARS-217ENST00000440048 ATL2Q8NHH9 583 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 SPATA22Q8NHS9 363 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 TBATAQ96M53 351 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 LYSMD1Q96S90 227 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 ADGRE3Q9BY15 652 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 SLC13A1Q9BZW2 595 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 DNPEPQ9ULA0 475 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 PCDHGA1Q9Y5H4 931 aa23.63■■□□□ 1.37
VARS-217ENST00000440048 MIF4GDA9UHW6 222 aaKnown RBP23.62■■□□□ 1.37
VARS-217ENST00000440048 ANKRD66B4E2M5 251 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 H7C0C1 242 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 CACNB4O00305 520 aaPredicted RBP23.62■■□□□ 1.37
VARS-217ENST00000440048 DDX3YO15523 660 aaKnown RBP23.62■■□□□ 1.37
VARS-217ENST00000440048 GCATO75600 419 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 MT-CYBP00156 380 aaPredicted RBP23.62■■□□□ 1.37
VARS-217ENST00000440048 PROS1P07225 676 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 C1SP09871 688 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 CD68P34810 354 aaPredicted RBP23.62■■□□□ 1.37
VARS-217ENST00000440048 ATP5OP48047 213 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 HK3P52790 923 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 STC1P52823 247 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 SRP54P61011 504 aaKnown RBP23.62■■□□□ 1.37
VARS-217ENST00000440048 C1orf61Q13536 156 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 GALNT3Q14435 633 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 SLC14A2Q15849 920 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 KDELC2Q7Z4H8 507 aa23.62■■□□□ 1.37
VARS-217ENST00000440048 UBL4BQ8N7F7 174 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms