RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PSMA8Q8TAA3 256 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 OSCP1Q8WVF1 389 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 HSFY1Q96LI6 401 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 PPP1R10Q96QC0 940 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 RANBP9Q96S59 729 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 HEPHQ9BQS7 1158 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 CHID1Q9BWS9 393 aa9.07□□□□□ -0.96
COPB1-202ENST00000439561 DUS2Q9NX74 493 aaKnown RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 GPC6Q9Y625 555 aaPredicted RBP9.07□□□□□ -0.96
COPB1-202ENST00000439561 BTAF1O14981 1849 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 A8MU76 341 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 BEST1O76090 585 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 NADKO95544 446 aaPredicted RBP9.06□□□□□ -0.96
COPB1-202ENST00000439561 NPR3P17342 541 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 LBPP18428 481 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 GABRB3P28472 473 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 CD68P34810 354 aaPredicted RBP9.06□□□□□ -0.96
COPB1-202ENST00000439561 HOXD12P35452 270 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 OXCT1P55809 520 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 GHRHRQ02643 423 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 GRB7Q14451 532 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 MOGQ16653 247 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 ZNF789Q5FWF6 425 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 CCNYL2Q5T2Q4 361 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 ZDHHC13Q8IUH4 622 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 PLD3Q8IV08 490 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 SLC7A5P1Q8MH63 180 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 C8orf59Q8N0T1 100 aaPredicted RBP9.06□□□□□ -0.96
COPB1-202ENST00000439561 FNDC5Q8NAU1 212 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 ITFG1Q8TB96 612 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 TWIST2Q8WVJ9 160 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 TEKT5Q96M29 485 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 GMLQ99445 158 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 MUC3BQ9H195 1237 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 OSBPL2Q9H1P3 480 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 TNFRSF12AQ9NP84 129 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 DDX28Q9NUL7 540 aaKnown RBP9.06□□□□□ -0.96
COPB1-202ENST00000439561 LIMD1Q9UGP4 676 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 VPS51Q9UID3 782 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 UBQLN1Q9UMX0 589 aaKnown RBP9.06□□□□□ -0.96
COPB1-202ENST00000439561 TTC24A2A3L6 582 aaPredicted RBP9.06□□□□□ -0.96
COPB1-202ENST00000439561 PPP6CO00743 305 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 PROZP22891 400 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 GJA8P48165 433 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 TRPC1P48995 793 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 SEPHS1P49903 392 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 GEMP55040 296 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 TPTEP56180 551 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 KYAT1Q16773 422 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 ELMSAN1Q6PJG2 1045 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 RETREG3Q86VR2 466 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 SLC15A3Q8IY34 581 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 CLYBLQ8N0X4 340 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 ANKFN1Q8N957 763 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 OR7A2PQ8NGA2 310 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 ELMO1Q92556 727 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 CCM2LQ9NUG4 571 aaPredicted RBP9.06□□□□□ -0.96
COPB1-202ENST00000439561 CORINQ9Y5Q5 1042 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 MAGED1Q9Y5V3 778 aaPredicted RBP9.06□□□□□ -0.96
COPB1-202ENST00000439561 COL24A1Q17RW2 1714 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 TCRBV3S1A0A5B6 114 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 MYO1GB0I1T2 1018 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 UBXN8O00124 270 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 AZIN1O14977 448 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 TSPAN1O60635 241 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 SNX2O60749 519 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 MATN1P21941 496 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 GSK3BP49841 420 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 DIO3P55073 304 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 MCCD1P59942 119 aaPredicted RBP9.06□□□□□ -0.96
COPB1-202ENST00000439561 POU4F1Q01851 419 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 ATP6AP1LQ52LC2 224 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 SGO1Q5FBB7 561 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 HECTD2Q5U5R9 776 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 C9orf57Q5W0N0 161 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 ANKRD26P1Q6NSI1 321 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 PRMT9Q6P2P2 845 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 UNC93AQ86WB7 457 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 MICU2Q8IYU8 434 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 TRPV3Q8NET8 790 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 CALML6Q8TD86 181 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 RSPH1Q8WYR4 309 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 FAM162AQ96A26 154 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 LRRC58Q96CX6 371 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 C3orf30Q96M34 536 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 RHOBTB2Q9BYZ6 727 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 GIN1Q9NXP7 522 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 RCOR3Q9P2K3 495 aaPredicted RBP9.06□□□□□ -0.96
COPB1-202ENST00000439561 RNF112Q9ULX5 631 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 VWA7Q9Y334 891 aa9.06□□□□□ -0.96
COPB1-202ENST00000439561 XIRP1Q702N8 1843 aaKnown RBP9.05□□□□□ -0.96
COPB1-202ENST00000439561 CLDN25C9JDP6 229 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 PSMD3O43242 534 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 CLASP2O75122 1294 aaKnown RBP9.05□□□□□ -0.96
COPB1-202ENST00000439561 DAB1O75553 588 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 CLPXO76031 633 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 LGALS2P05162 132 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 SBK3P0C264 359 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 GSTT2P0CG29 244 aa9.05□□□□□ -0.96
COPB1-202ENST00000439561 GSTT2BP0CG30 244 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms