RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 MRPL40Q9NQ50 206 aaKnown RBP20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 KCTD5Q9NXV2 234 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 SIRPGQ9P1W8 387 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 RABGEF1Q9UJ41 708 aa20.33■□□□□ 0.85
NCKIPSD-206ENST00000439518 SHROOM3Q8TF72 1996 aa20.33■□□□□ 0.84
NCKIPSD-206ENST00000439518 SSU72P8A0A1W2PR75 194 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 PSMD11O00231 422 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 PDE2AO00408 941 aaPredicted RBP20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 MATN3O15232 486 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 FZD6O60353 706 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 NFKBIAP25963 317 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 GJC1P36383 396 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 ERVPABLB-1P60509 514 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 TRIM14Q14142 442 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 IHHQ14623 411 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 PTPRRQ15256 657 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 SKOR2Q2VWA4 1001 aaPredicted RBP20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 ARMC12Q5T9G4 340 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 OGFOD3Q6PK18 319 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 GPR156Q8NFN8 814 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 DTD2Q96FN9 168 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 SEMA3CQ99985 751 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 TEX101Q9BY14 249 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 LCMT1Q9UIC8 334 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 RAI2Q9Y5P3 530 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 BPTFQ12830 3046 aa20.32■□□□□ 0.84
NCKIPSD-206ENST00000439518 CBFA2T2O43439 604 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 PDHA1P08559 390 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 KRT7P08729 469 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 TMEM253P0C7T8 217 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 CYP2A6P11509 494 aaPredicted RBP20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 MYCLP1P12525 358 aaPredicted RBP20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 MAN1A1P33908 653 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 ETV3P41162 512 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 Q6ZVL8 140 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 USP45Q70EL2 814 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 TSPAN33Q86UF1 283 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 MAP7D3Q8IWC1 876 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 PQLC3Q8N755 202 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 OR6C4Q8NGE1 309 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 CCDC74AQ96AQ1 378 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 POLR1EQ9GZS1 481 aaKnown RBP20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 TMEM168Q9H0V1 697 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 PRORYQ9H606 182 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 CYP4F12Q9HCS2 524 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 AMACRQ9UHK6 382 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 SATB2Q9UPW6 733 aa20.31■□□□□ 0.84
NCKIPSD-206ENST00000439518 PRSS38A1L453 326 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 MAP3K6O95382 1288 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 CCNCP24863 283 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 TEAD1P28347 426 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 PDX1P52945 283 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 PCBP4P57723 403 aaKnown RBP20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 TLE3Q04726 772 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 CCDC173Q0VFZ6 552 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 SPIDRQ14159 915 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 IFI16Q16666 785 aaKnown RBP20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 DENND2CQ68D51 928 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 TIGD7Q6NT04 549 aaPredicted RBP20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 TECPR1Q7Z6L1 1165 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 TAF8Q7Z7C8 310 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 HEATR4Q86WZ0 1026 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 SPACA3Q8IXA5 215 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 ZNF248Q8NDW4 579 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 PRR11Q96HE9 360 aaPredicted RBP20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 BBC3Q96PG8 261 aaPredicted RBP20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 PHPT1Q9NRX4 125 aaPredicted RBP20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 PCDHGA8Q9Y5G5 932 aa20.3■□□□□ 0.84
NCKIPSD-206ENST00000439518 NOBOXO60393 691 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 FUCA1P04066 466 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 CEACAM5P06731 702 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 CTPS1P17812 591 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 CES1P23141 567 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 DSC2Q02487 901 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 GBE1Q04446 702 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 DPTQ07507 201 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 ITKQ08881 620 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 SLC10A2Q12908 348 aaPredicted RBP20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 ARHGEF7Q14155 803 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 C3orf38Q5JPI3 329 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 VSTM4Q8IW00 320 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 FAM46DQ8NEK8 389 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 CCL4L1Q8NHW4 92 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 ARRDC2Q8TBH0 407 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 RAPGEF5Q92565 580 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 SLC46A1Q96NT5 459 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 SMIM14Q96QK8 99 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 CHP1Q99653 195 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 FRMD8Q9BZ67 464 aaPredicted RBP20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 DEF6Q9H4E7 631 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 THSD1Q9NS62 852 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 ABHD10Q9NUJ1 306 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 RBM22Q9NW64 420 aaKnown RBP eCLIP20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 ZNHIT6Q9NWK9 470 aaKnown RBP20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 KIF26BQ2KJY2 2108 aa20.29■□□□□ 0.84
NCKIPSD-206ENST00000439518 A0A0U1RQS6 177 aa20.28■□□□□ 0.84
NCKIPSD-206ENST00000439518 A0A1W2PQM1 296 aa20.28■□□□□ 0.84
NCKIPSD-206ENST00000439518 PMS2P1A4D2B8 440 aa20.28■□□□□ 0.84
NCKIPSD-206ENST00000439518 AKR1B10O60218 316 aa20.28■□□□□ 0.84
NCKIPSD-206ENST00000439518 CCNB1P14635 433 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms