RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ABT1Q9ULW3 272 aaKnown RBP9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 TIMM22Q9Y584 194 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 FADS3Q9Y5Q0 445 aa9.96□□□□□ -0.81
CDC42SE1-202ENST00000439374 SMIM35A0A1B0GVV1 85 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 ANGPT2O15123 496 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 RSL1D1O76021 490 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 OXSR1O95747 527 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 CCR1P32246 355 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 PGFP49763 221 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 DAB2P98082 770 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 OCA2Q04671 838 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 PRKCQQ04759 706 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 YWHAHQ04917 246 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 CDH17Q12864 832 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 GRM2Q14416 872 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 RAB39AQ14964 217 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 PIGGQ5H8A4 983 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 PAGE2BQ5JRK9 111 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 C6orf10Q5SRN2 563 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 ANKRD34AQ69YU3 496 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 NANOGP8Q6NSW7 305 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 FAM117BQ6P1L5 589 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 NEK10Q6ZWH5 1172 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 HS3ST5Q8IZT8 346 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 THEM5Q8N1Q8 247 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 EFHBQ8N7U6 833 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 CATSPER1Q8NEC5 780 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 PPHLN1Q8NEY8 458 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 GLMNQ92990 594 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 RPRD1AQ96P16 312 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 ADI1Q9BV57 179 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 C1orf21Q9H246 121 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 ALG9Q9H6U8 611 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 MOCS1Q9NZB8 636 aa9.96□□□□□ -0.82
CDC42SE1-202ENST00000439374 FAM95CA0A1B0GW59 222 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 KPNA6O60684 536 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 ABCB1P08183 1280 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 LINC00032P0C843 101 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 ELNP15502 786 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 STMN1P16949 149 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 CD86P42081 329 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 TRIM32Q13049 653 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 MAP2K5Q13163 448 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLC13A2Q13183 592 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 TAF12Q16514 161 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 UBXN11Q5T124 520 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 GRTP1Q5TC63 336 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 CNSTQ6PJW8 725 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 ERI1Q8IV48 349 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 SHCBP1Q8NEM2 672 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 PSMA8Q8TAA3 256 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 GIPC2Q8TF65 315 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 SMARCD1Q96GM5 515 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 MLPHQ9BV36 600 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 TNFRSF12AQ9NP84 129 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 PNPLA3Q9NST1 481 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 DDX28Q9NUL7 540 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 PADI3Q9ULW8 664 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 A0A0U1RQS6 177 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 IQCA1LA6NCM1 817 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 DLX3O60479 287 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 DLGAP3O95886 979 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 IRF1P10914 325 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 KCNA5P22460 613 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 TCEA1P23193 301 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 CLCN2P51788 898 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 CRYBB1P53674 252 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 RGS21Q2M5E4 152 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 SPANXN3Q5MJ09 141 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 C10orf120Q5SQS8 335 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZMIZ2Q8NF64 920 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 RMDN1Q96DB5 314 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 PALMDQ9NP74 551 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 TRMT13Q9NUP7 481 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 OLAHQ9NV23 265 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 IPO11Q9UI26 975 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 CROTQ9UKG9 612 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 POU2F3Q9UKI9 436 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 KCTD3Q9Y597 815 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 TNS1Q9HBL0 1735 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 DOCK3Q8IZD9 2030 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 HACD1B0YJ81 288 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 TRIM38O00635 465 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 E2F6O75461 281 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 AP2A1O95782 977 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 AHSGP02765 367 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 FYNP06241 537 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 PRKACGP22612 351 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 CD68P34810 354 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 NR4A2P43354 598 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 LHX1P48742 406 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 CDK9P50750 372 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 TAS2R39P59534 338 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 SFSWAPQ12872 951 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZBTB6Q15916 424 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 PSMD5Q16401 504 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 TMEM236Q5W0B7 351 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 RAP1GAP2Q684P5 730 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 REP15Q6BDI9 236 aa9.95□□□□□ -0.82
CDC42SE1-202ENST00000439374 GDF6Q6KF10 455 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms