RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 NLRC5Q86WI3 1866 aa16.44■□□□□ 0.22
CLCNKA-203ENST00000439316 TET1Q8NFU7 2136 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 ARHGAP10A1A4S6 786 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 WASH4PA8MWX3 477 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 E9PAM4 449 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 ACADVLP49748 655 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 SERPINH1P50454 418 aaKnown RBP16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 MTX3Q5HYI7 312 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 LARP4Q71RC2 724 aaKnown RBP eCLIP16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 AMIGO2Q86SJ2 522 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 METTL23Q86XA0 190 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 CILP2Q8IUL8 1156 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 PHF21BQ96EK2 531 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 IMP4Q96G21 291 aaKnown RBP16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 FNIP2Q9P278 1114 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 TMCO1Q9UM00 188 aa16.43■□□□□ 0.22
CLCNKA-203ENST00000439316 A0A1B0GTW7 788 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 CCDC160A6NGH7 325 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 TMCC1O94876 653 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 CSPG5O95196 566 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 YWHAQP27348 245 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 SLC26A3P40879 764 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 PGFP49763 221 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 NFKB2Q00653 900 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 ZNF678Q5SXM1 525 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 HMBOX1Q6NT76 420 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 LRRC8DQ7L1W4 858 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 C14orf80Q86SX3 495 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 RTN4RL1Q86UN2 441 aaPredicted RBP16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 LRRTM3Q86VH5 581 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 OR9I1Q8NGQ6 314 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 OR10T2Q8NGX3 314 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 EZH1Q92800 747 aaPredicted RBP16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 PBXIP1Q96AQ6 731 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 TMEM209Q96SK2 561 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 NOL6Q9H6R4 1146 aaKnown RBP16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 MPP6Q9NZW5 540 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 VWA7Q9Y334 891 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 HS3ST4Q9Y661 456 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 MRPL42Q9Y6G3 142 aaKnown RBP16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 ARHGEF37A1IGU5 675 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 SLC7A4O43246 635 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 PQBP1O60828 265 aaKnown RBP16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 SELPP16109 830 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 ATN1P54259 1190 aaPredicted RBP16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 CDKN2DP55273 166 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 CLEC6AQ6EIG7 209 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 TMEM207Q6UWW9 146 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 SCD5Q86SK9 330 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 ANKFN1Q8N957 763 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 SNX31Q8N9S9 440 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 B4GALNT2Q8NHY0 566 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 FATE1Q969F0 183 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 ROPN1LQ96C74 230 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 HAUS8Q9BT25 410 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 SEZ6LQ9BYH1 1024 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 MFSD1Q9H3U5 465 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 SNX13Q9Y5W8 968 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 CEPT1Q9Y6K0 416 aa16.42■□□□□ 0.22
CLCNKA-203ENST00000439316 ZNF23P17027 643 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 FGFR3P22607 806 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 BRCC3P46736 316 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 SLC5A3P53794 718 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 UNC50Q53HI1 259 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 FAM219BQ5XKK7 198 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 CD300LGQ6UXG3 332 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 CYP2R1Q6VVX0 501 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 FUNDC1Q8IVP5 155 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 TSPAN14Q8NG11 270 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 C19orf60Q96EN9 201 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 SLC29A1Q99808 456 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 EFHD1Q9BUP0 239 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 ALG9Q9H6U8 611 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 VPS45Q9NRW7 570 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 THEGQ9P2T0 379 aa16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 MTF2Q9Y483 593 aaPredicted RBP16.41■□□□□ 0.22
CLCNKA-203ENST00000439316 MROH6A6NGR9 719 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 BBIP1A8MTZ0 92 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 TNFRSF10BO14763 440 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 S1PR4O95977 384 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 MOCS2O96007 188 aaPredicted RBP16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 POMCP01189 267 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 ALDOCP09972 364 aaKnown RBP16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 GPX3P22352 226 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 KCNC1P48547 511 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 SLC7A2P52569 658 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 BFSP2Q13515 415 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 EML3Q32P44 896 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 UGT3A2Q3SY77 523 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 PAN2Q504Q3 1202 aaKnown RBP16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 GPR158Q5T848 1215 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 LAYNQ6UX15 382 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 ISCA2Q86U28 154 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 DHFR2Q86XF0 187 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 DNAJC1Q96KC8 554 aaKnown RBP16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 RGS18Q9NS28 235 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 ARMC1Q9NVT9 282 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 H3BNH8 94 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 M0QZQ0 153 aa16.4■□□□□ 0.22
CLCNKA-203ENST00000439316 H6PDO95479 791 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms