RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 MCMBPQ9BTE3 642 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 WDR55Q9H6Y2 383 aaPredicted RBP17.2■□□□□ 0.34
PTPRF-209ENST00000438120 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 BTBD19C9JJ37 291 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 CCL22O00626 93 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 RNF43Q68DV7 783 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 CD101Q93033 1021 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 RNPEPL1Q9HAU8 725 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 TMEM51Q9NW97 253 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 OR6C75A6NL08 312 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 SLC28A2O43868 658 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 C1RP00736 705 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 CCNYL3P0C7X3 344 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 CLCNKBP51801 687 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 RALGDSQ12967 914 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 ITGADQ13349 1161 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 ARCQ7LC44 396 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 TNKS2Q9H2K2 1166 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 ELL3Q9HB65 397 aaPredicted RBP17.2■□□□□ 0.34
PTPRF-209ENST00000438120 CLN6Q9NWW5 311 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 PADI3Q9ULW8 664 aa17.2■□□□□ 0.34
PTPRF-209ENST00000438120 PTDSS1P48651 473 aaKnown RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 GLUD2P49448 558 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 CXCR3P49682 368 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 NOGQ13253 232 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 TIGD2Q4W5G0 525 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 KLHL12Q53G59 568 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 TAPT1Q6NXT6 567 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 PSRC1Q6PGN9 363 aaPredicted RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 DPEP3Q9H4B8 488 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 EQTNQ9NQ60 294 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 PRKG2Q13237 762 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 CIR1Q86X95 450 aaPredicted RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 PTCD3Q96EY7 689 aaKnown RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 FNDC11Q9BVV2 318 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 CDH19Q9H159 772 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 SAMHD1Q9Y3Z3 626 aaKnown RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 SCAMP1O15126 338 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 SLC25A12O75746 678 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 MPSTP25325 297 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 AQP1P29972 269 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 SLC5A3P53794 718 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 LPIN1Q14693 890 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 BRMS1LQ5PSV4 323 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 FAAH2Q6GMR7 532 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 TXNDC11Q6PKC3 985 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 ADGRG2Q8IZP9 1017 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 RP9Q8TA86 221 aaKnown RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 PRKAB1Q9Y478 270 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 ZNF24P17028 368 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 ADRA1BP35368 520 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 RTP1P59025 263 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 GBE1Q04446 702 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 KCNA10Q16322 511 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 PTGFRNQ9P2B2 879 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 GSTK1Q9Y2Q3 226 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 REXO2Q9Y3B8 237 aaKnown RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 U3KQV3 271 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 FOXO6A8MYZ6 492 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 KPNA4O00629 521 aaPredicted RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 ZBTB11O95625 1053 aaPredicted RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 ADH1CP00326 375 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 CHN2P52757 468 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 ATP6V0D1P61421 351 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 CBX2Q14781 532 aaPredicted RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 CUZD1Q86UP6 607 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 ACMSDQ8TDX5 336 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 CLEC4MQ9H2X3 399 aaPredicted RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 CRISPLD1Q9H336 500 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 C12orf65Q9H3J6 166 aaKnown RBP17.19■□□□□ 0.34
PTPRF-209ENST00000438120 GULP1Q9UBP9 304 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 AP3M1Q9Y2T2 418 aa17.19■□□□□ 0.34
PTPRF-209ENST00000438120 CACNB4O00305 520 aaPredicted RBP17.18■□□□□ 0.34
PTPRF-209ENST00000438120 ALOX15BO15296 676 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 DBTP11182 482 aaKnown RBP17.18■□□□□ 0.34
PTPRF-209ENST00000438120 PPM1AP35813 382 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 RHAGQ02094 409 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 EPS8Q12929 822 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 GK5Q6ZS86 529 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 FAM220AQ7Z4H9 259 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 C4orf32Q8N8J7 132 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 DCBLD1Q8N8Z6 715 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 TSSK3Q96PN8 268 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 SGK2Q9HBY8 427 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 LRRC4CQ9HCJ2 640 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 CCDC85CA6NKD9 419 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 FNBP1LQ5T0N5 605 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 IRGCQ6NXR0 463 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 CHRAC1Q9NRG0 131 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 SNX10Q9Y5X0 201 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 ZNF780BQ9Y6R6 833 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 ANPEPP15144 967 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 RAPSNQ13702 412 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 FAM171BQ6P995 826 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 SLC27A6Q9Y2P4 619 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 TCRBV7S2A1N4TA0A589 114 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 URADA6NGE7 173 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 SERPINA6P08185 405 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 PAX7P23759 505 aa17.18■□□□□ 0.34
PTPRF-209ENST00000438120 PSMD8P48556 350 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms