RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ZYG11AQ6WRX3 759 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 FKBP9P1Q75LS8 142 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ERO1BQ86YB8 467 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 PLD3Q8IV08 490 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TP53INP2Q8IXH6 220 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 PYROXD2Q8N2H3 581 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 PACRGLQ8N7B6 248 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 HTR3CQ8WXA8 447 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 FKBP10Q96AY3 582 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 POMKQ9H5K3 350 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TRIM64BA6NI03 449 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 RNF103O00237 685 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 AP3D1O14617 1153 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 SSX4O60224 188 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 UGT2B11O75310 529 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CABYRO75952 493 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ALDH1A2O94788 518 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CAPN1P07384 714 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 SBK3P0C264 359 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TPSB2P20231 275 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TPSAB1Q15661 275 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 PCSK7Q16549 785 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 STEAP3Q658P3 488 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 JADE1Q6IE81 842 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CYP20A1Q6UW02 462 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 MCFD2Q8NI22 146 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 GMCL1Q96IK5 515 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 SLC38A10Q9HBR0 1119 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF221Q9UK13 617 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 PCNTO95613 3336 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TYW5A2RUC4 315 aaKnown RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 KPNA6O60684 536 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 IL1R1P14778 569 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF143P52747 638 aaPredicted RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 SLC12A1Q13621 1099 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CTF1Q16619 201 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 RAP1GAP2Q684P5 730 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 PMF1Q6P1K2 205 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TRAF7Q6Q0C0 670 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 GET4Q7L5D6 327 aaPredicted RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 SH3BP5LQ7L8J4 393 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 OTOP3Q7RTS5 596 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 SPERTQ8NA61 448 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TMEM74Q96NL1 305 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TAAR1Q96RJ0 339 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 GAD1Q99259 594 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 AP5M1Q9H0R1 490 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TRPC5OSA6NMA1 111 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ANGPT2O15123 496 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 MICAL2O94851 1124 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 PROZP22891 400 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CRHBPP24387 322 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 SERPINB10P48595 397 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF135P52742 658 aaPredicted RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CDH13P55290 713 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 P2RX3P56373 397 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 AASDHQ4L235 1098 aaPredicted RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 THAP5Q7Z6K1 395 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 SCUBE3Q8IX30 993 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 GALNT12Q8IXK2 581 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 C8orf59Q8N0T1 100 aaPredicted RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TXNDC15Q96J42 360 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 THG1LQ9NWX6 298 aaKnown RBP7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CNTN6Q9UQ52 1028 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 PDE10AQ9Y233 779 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TRIM64A6NGJ6 449 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 C16orf96A6NNT2 1141 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CENPXA8MT69 81 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 VWA5AO00534 786 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 EDN1P05305 212 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CYP3A5P20815 502 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CNTN2Q02246 1040 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CTBP1Q13363 440 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 FAM83EQ2M2I3 478 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 DPY19L1Q2PZI1 675 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ZFP69Q49AA0 526 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 FAM160B1Q5W0V3 765 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 FAM183BPQ6ZVS7 135 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 MICU2Q8IYU8 434 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 MINDY2Q8NBR6 621 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TOP1MTQ969P6 601 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 CLSTN3Q9BQT9 956 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 B3GNT5Q9BYG0 378 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 TRIM15Q9C019 465 aa7.47□□□□□ -1.21
CPSF6-202ENST00000435070 ZFC3H1O60293 1989 aaKnown RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 SLCO1B7G3V0H7 640 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 M0QX08 132 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 DBTP11182 482 aaKnown RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 UBL4AP11441 157 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 RFC2P35250 354 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 POLD2P49005 469 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 GP2P55259 537 aaKnown RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 SEMA5AQ13591 1074 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 TAF2Q6P1X5 1199 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 AMIGO3Q86WK7 504 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 METTL23Q86XA0 190 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 GRAMD2AQ8IUY3 354 aa7.46□□□□□ -1.21
CPSF6-202ENST00000435070 TXNDC5Q8NBS9 432 aaKnown RBP7.46□□□□□ -1.21
CPSF6-202ENST00000435070 OR6Q1Q8NGQ2 317 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms