RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 DIS3LQ8TF46 1054 aaKnown RBP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 IL12RB2Q99665 862 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 ZBED2Q9BTP6 218 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 MT-ND1P03886 318 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 ALPIP09923 528 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 ACRP10323 421 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 XRCC1P18887 633 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 GGT5P36269 586 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 THOP1P52888 689 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 CDK18Q07002 472 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 SEMA3AQ14563 771 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 UGP2Q16851 508 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 FUT11Q495W5 492 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 MAP3K21Q5TCX8 1036 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 RNF219Q5W0B1 726 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 TIGD7Q6NT04 549 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-203ENST00000434376 KLC3Q6P597 504 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 RNF111Q6ZNA4 994 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 IRGQQ8WZA9 623 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 DTNBP1Q96EV8 351 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 UNC93B1Q9H1C4 597 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 GALPQ9UBC7 116 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 VPS28Q9UK41 221 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 ARHGAP26Q9UNA1 814 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 NEU3Q9UQ49 428 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 TLR6Q9Y2C9 796 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 SPO11Q9Y5K1 396 aa15.6■□□□□ 0.09
SCARF1-203ENST00000434376 HEATR9A2RTY3 570 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 MAGEB3O15480 346 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 GLP2RO95838 553 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 LINC00032P0C843 101 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 MBL2P11226 248 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 ATF6P18850 670 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 ARCN1P48444 511 aaKnown RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 HCAR3P49019 387 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 MSLNQ13421 630 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 OR13J1Q8NGT2 312 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 PPWD1Q96BP3 646 aaKnown RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 PGAP3Q96FM1 320 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 PKMYT1Q99640 499 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 MRPL1Q9BYD6 325 aaKnown RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 RNF38Q9H0F5 515 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 SLC25A51Q9H1U9 297 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 LIN28AQ9H9Z2 209 aaKnown RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 MID1IP1Q9NPA3 183 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 DNAAF2Q9NVR5 837 aaKnown RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 POMPQ9Y244 141 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 SRP72O76094 671 aaKnown RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 TOMM70O94826 608 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 RHOCP08134 193 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 SERPINF2P08697 491 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 SLC2A3P11169 496 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 ATP5C1P36542 298 aaKnown RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 C1QTNF8P60827 252 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 LSAMPQ13449 338 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 CYLC2Q14093 348 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 CCNIQ14094 377 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 FSCBQ5H9T9 825 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 FBXL19Q6PCT2 694 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 TMEM207Q6UWW9 146 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 GLT6D1Q7Z4J2 308 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 ZBTB46Q86UZ6 589 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 CCDC97Q96F63 343 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 BTN2A3PQ96KV6 586 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 TTPALQ9BTX7 342 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 C1orf50Q9BV19 199 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 TNKS2Q9H2K2 1166 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 LZTS1Q9Y250 596 aa15.59■□□□□ 0.09
SCARF1-203ENST00000434376 HEMK1Q9Y5R4 338 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-203ENST00000434376 NIPSNAP2O75323 286 aa15.58■□□□□ 0.09
SCARF1-203ENST00000434376 NDUFS3O75489 264 aa15.58■□□□□ 0.09
SCARF1-203ENST00000434376 CYP11A1P05108 521 aa15.58■□□□□ 0.09
SCARF1-203ENST00000434376 GALTP07902 379 aa15.58■□□□□ 0.09
SCARF1-203ENST00000434376 FLOT2Q14254 428 aa15.58■□□□□ 0.09
SCARF1-203ENST00000434376 PTPRNQ16849 979 aa15.58■□□□□ 0.09
SCARF1-203ENST00000434376 C6orf52Q5T4I8 152 aa15.58■□□□□ 0.09
SCARF1-203ENST00000434376 CLDN19Q8N6F1 224 aa15.58■□□□□ 0.09
SCARF1-203ENST00000434376 ARL14EPQ8N8R7 260 aaPredicted RBP15.58■□□□□ 0.09
SCARF1-203ENST00000434376 ACOX2Q99424 681 aa15.58■□□□□ 0.09
SCARF1-203ENST00000434376 APOL5Q9BWW9 433 aa15.58■□□□□ 0.09
SCARF1-203ENST00000434376 POLR1EQ9GZS1 481 aaKnown RBP15.58■□□□□ 0.09
SCARF1-203ENST00000434376 A0A1B0GTL3 188 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 A8MT66 165 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 ZBBXA8MT70 800 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 AXIN1O15169 862 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 GRID2O43424 1007 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 KLKB1P03952 638 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 MZF1P28698 734 aaPredicted RBP15.58■□□□□ 0.08
SCARF1-203ENST00000434376 AGTR2P50052 363 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 FOXA1P55317 472 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 OXCT1P55809 520 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 NRF1Q16656 503 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 ZYG11AQ6WRX3 759 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 DSELQ8IZU8 1212 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 TDRKHQ9Y2W6 561 aaKnown RBP15.58■□□□□ 0.08
SCARF1-203ENST00000434376 SF3B1O75533 1304 aaKnown RBP eCLIP15.58■□□□□ 0.082e-14■■■■■ 172.3
SCARF1-203ENST00000434376 SPEGQ15772 3267 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 NR5A2O00482 541 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 SH3BGRLO75368 114 aa15.58■□□□□ 0.08
SCARF1-203ENST00000434376 CKMP06732 381 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms