RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 INTS10Q9NVR2 710 aaKnown RBP13.97□□□□□ -0.17
HOXC4-202ENST00000430889 SAGE1Q9NXZ1 904 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 ARHGAP26Q9UNA1 814 aa13.97□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.96□□□□□ -0.17
HOXC4-202ENST00000430889 LOC100653049A0A140TA62 436 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 TRPC5OSA6NMA1 111 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 KRT34O76011 436 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 UPP2O95045 317 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 OLFM2O95897 454 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 THRAP10827 490 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 HNRNPLP14866 589 aaKnown RBP eCLIP13.96□□□□□ -0.17
HOXC4-202ENST00000430889 ACADSP16219 412 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF37AP17032 561 aaPredicted RBP13.96□□□□□ -0.17
HOXC4-202ENST00000430889 IMPDH1P20839 514 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 MTTPP55157 894 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF177Q13360 481 aaPredicted RBP13.96□□□□□ -0.17
HOXC4-202ENST00000430889 PLD1Q13393 1074 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 CUL3Q13618 768 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 CCNIQ14094 377 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 TAF11Q15544 211 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 PDCD2Q16342 344 aaPredicted RBP13.96□□□□□ -0.17
HOXC4-202ENST00000430889 PPM1LQ5SGD2 360 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 ZNF678Q5SXM1 525 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 C1orf53Q5VUE5 145 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 C1orf146Q5VVC0 180 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 AAGABQ6PD74 315 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 CYHR1Q6ZMK1 362 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 RNF135Q8IUD6 432 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 FAM217AQ8IXS0 508 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 DEFB107AQ8IZN7 70 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 RP9Q8TA86 221 aaKnown RBP13.96□□□□□ -0.17
HOXC4-202ENST00000430889 LPGAT1Q92604 370 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 TRMOQ9BU70 441 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 SPON2Q9BUD6 331 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 NACA2Q9H009 215 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 ZBTB26Q9HCK0 441 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 TRPC7Q9HCX4 862 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 DNMT3BQ9UBC3 853 aaKnown RBP13.96□□□□□ -0.17
HOXC4-202ENST00000430889 VPS28Q9UK41 221 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 CRYL1Q9Y2S2 319 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 OR51B4Q9Y5P0 310 aa13.96□□□□□ -0.17
HOXC4-202ENST00000430889 UBFD1O14562 309 aaKnown RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 NVLO15381 856 aaKnown RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 FKBP6O75344 327 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 SORBS2O94875 1100 aaKnown RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 CRTAMO95727 393 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 PDHA1P08559 390 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 PRSS56P0CW18 603 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 HSPA1AP0DMV8 641 aaKnown RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 HSPA1BP0DMV9 641 aaKnown RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 MTHFD2P13995 350 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 ANPEPP15144 967 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 CDC25CP30307 473 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 ATN1P54259 1190 aaPredicted RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 TLE2Q04725 743 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 UNC50Q53HI1 259 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 C6orf163Q5TEZ5 329 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 AFTPHQ6ULP2 937 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 Q6ZNB5 142 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 CUZD1Q86UP6 607 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 SNX32Q86XE0 403 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 FBXW8Q8N3Y1 598 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 RHEBL1Q8TAI7 183 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 HMGCLL1Q8TB92 370 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 DTX3LQ8TDB6 740 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 TOP1MTQ969P6 601 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 CATSPER2Q96P56 530 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 ATOH8Q96SQ7 321 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 ZBED2Q9BTP6 218 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 ALG9Q9H6U8 611 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 CYP4F11Q9HBI6 524 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 CYP4F12Q9HCS2 524 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 SCUBE2Q9NQ36 999 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 LHX3Q9UBR4 397 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 COPG1Q9Y678 874 aaKnown RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 H3BMM5 538 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 PDE5AO76074 875 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 ABL2P42684 1182 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 ALDH1A3P47895 512 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 SCNN1BP51168 640 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 TBL3Q12788 808 aaKnown RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 IKBKEQ14164 716 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 OR4D1Q15615 310 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 CCDC6Q16204 474 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 TRIM60Q495X7 471 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 RNF219Q5W0B1 726 aaPredicted RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 KIAA1841Q6NSI8 718 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 NCEH1Q6PIU2 408 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 RPS27LQ71UM5 84 aaKnown RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 TCEAL8Q8IYN2 117 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 TTC30BQ8N4P2 665 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 DNAJC9Q8WXX5 260 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 N4BP2L2Q92802 583 aaPredicted RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 ALG14Q96F25 216 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 EXOC2Q96KP1 924 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 PPP1R36Q96LQ0 422 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 SMIM14Q96QK8 99 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 TCF12Q99081 682 aa13.95□□□□□ -0.18
HOXC4-202ENST00000430889 DDX50Q9BQ39 737 aaKnown RBP13.95□□□□□ -0.18
HOXC4-202ENST00000430889 IL21Q9HBE4 155 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms