RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 KLKB1P03952 638 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 ATP6V1B1P15313 513 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 PFKLP17858 780 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 TTKP33981 857 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 CDH6P55285 790 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 TFF2Q03403 129 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 SLC18A2Q05940 514 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 RING1Q06587 406 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 SMAD4Q13485 552 aaKnown RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 PIK3R6Q5UE93 754 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 RAP1GAP2Q684P5 730 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 PRUNE1Q86TP1 453 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 KCTD6Q8NC69 237 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 SUSD6Q92537 303 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 BTN2A3PQ96KV6 586 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 CCDC138Q96M89 665 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 ASB16Q96NS5 453 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 NECTIN4Q96NY8 510 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 CALN1Q9BXU9 219 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 ARMCX1Q9P291 453 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 RABGEF1Q9UJ41 708 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 LSM7Q9UK45 103 aaKnown RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 TIMM22Q9Y584 194 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 HS3ST4Q9Y661 456 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 FAM72CH0Y354 149 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 DNALI1O14645 258 aaPredicted RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 MCF2LO15068 1137 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 CPA2P48052 419 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 GSSP48637 474 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 HNRNPFP52597 415 aaKnown RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 TXNL4AP83876 142 aaKnown RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 MORF4L2Q15014 288 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 MOGQ16653 247 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 PHKG1Q16816 387 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 LRRC36Q1X8D7 754 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 BOLA3Q53S33 107 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 MS4A13Q5J8X5 152 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 FAM72AQ5TYM5 149 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 FAM72DQ6L9T8 149 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 DRICH1Q6PGQ1 229 aaPredicted RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 POLNQ7Z5Q5 900 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 PRPF39Q86UA1 669 aaKnown RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 ALYREFQ86V81 257 aaKnown RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 GPR180Q86V85 440 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 FAM72BQ86X60 149 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 BBS7Q8IWZ6 715 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 SMARCD2Q92925 531 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 NTAN1Q96AB6 310 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 RSPRY1Q96DX4 576 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 DOK1Q99704 481 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 C10orf88Q9H8K7 445 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 SAYSD1Q9NPB0 183 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 DDX56Q9NY93 547 aaKnown RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 GDE1Q9NZC3 331 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 PPARGC1AQ9UBK2 798 aaKnown RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 KLHL3Q9UH77 587 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 BCAP29Q9UHQ4 241 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 ZMYM5Q9UJ78 669 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 AGO1Q9UL18 857 aaKnown RBP11.47□□□□□ -0.57
CECR3-201ENST00000428828 SLC30A1Q9Y6M5 507 aa11.47□□□□□ -0.57
CECR3-201ENST00000428828 MYO10Q9HD67 2058 aa11.46□□□□□ -0.57
CECR3-201ENST00000428828 TCF20Q9UGU0 1960 aaKnown RBP11.46□□□□□ -0.57
CECR3-201ENST00000428828 AQP9O43315 295 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 ACSL4O60488 711 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 TSPAN3O60637 253 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 LAMP2P13473 410 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 SLC11A2P49281 568 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 WASHC5Q12768 1159 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 MMRN1Q13201 1228 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 KLF1Q13351 362 aaPredicted RBP11.46□□□□□ -0.58
CECR3-201ENST00000428828 ZNF77Q15935 545 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 RABGAP1LQ5R372 815 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 LRRC38Q5VT99 294 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 KAZNQ674X7 775 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 ATG16L1Q676U5 607 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 NADSYN1Q6IA69 706 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 KATNAL2Q8IYT4 538 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 CELF5Q8N6W0 485 aaKnown RBP11.46□□□□□ -0.58
CECR3-201ENST00000428828 TRUB1Q8WWH5 349 aaKnown RBP11.46□□□□□ -0.58
CECR3-201ENST00000428828 APOPT1Q96IL0 206 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 KXD1Q9BQD3 176 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 OR12D3Q9UGF7 316 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 PTBP2Q9UKA9 531 aaKnown RBP11.46□□□□□ -0.58
CECR3-201ENST00000428828 VANGL2Q9ULK5 521 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 SHOC2Q9UQ13 582 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 POMPQ9Y244 141 aa11.46□□□□□ -0.58
CECR3-201ENST00000428828 NYNRINQ9P2P1 1898 aaKnown RBP11.45□□□□□ -0.58
CECR3-201ENST00000428828 ARHGAP42A6NI28 874 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 K7EPI3 171 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 TNFRSF10AO00220 468 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 SIN3BO75182 1162 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 H6PDO95479 791 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 GOT1P17174 413 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 KDELR1P24390 212 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 SLC6A4P31645 630 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 L1CAMP32004 1257 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 SERPINB6P35237 376 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 AIF1P55008 147 aa11.45□□□□□ -0.58
CECR3-201ENST00000428828 ATP6V0D1P61421 351 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms