RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 FEZ2Q9UHY8 353 aaPredicted RBP14.58□□□□□ -0.08
SGCE-204ENST00000428696 ANKRD6Q9Y2G4 727 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 PPIL1Q9Y3C6 166 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 SNX11Q9Y5W9 270 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 FANCMQ8IYD8 2048 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 EP300Q09472 2414 aaPredicted RBP14.57□□□□□ -0.08
SGCE-204ENST00000428696 SPAG17Q6Q759 2223 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 LOC285095A0A1B0GVY8 99 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 POM121BA6NF01 834 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 TLR4O00206 839 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 ARHGAP33O14559 1287 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 BUD23O43709 281 aaKnown RBP14.57□□□□□ -0.08
SGCE-204ENST00000428696 EPOP01588 193 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 KRT14P02533 472 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 WNT1P04628 370 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 APRTP07741 180 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 THEGLP0DJG4 465 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 TPH1P17752 444 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 ENGP17813 658 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 FDFT1P37268 417 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 GPS1Q13098 491 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 INPP5AQ14642 412 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 IRF4Q15306 451 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 SLC14A2Q15849 920 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 KIF19Q2TAC6 998 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 UAP1L1Q3KQV9 507 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 SLC23A3Q6PIS1 610 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 PPP1R21Q6ZMI0 780 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 PRR23CQ6ZRP0 262 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 NYAP1Q6ZVC0 841 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 GPR161Q8N6U8 529 aaKnown RBP14.57□□□□□ -0.08
SGCE-204ENST00000428696 DNAAF3Q8N9W5 541 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 MFSD2AQ8NA29 543 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 OR13H1Q8NG92 308 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 C1orf216Q8TAB5 229 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 RTP4Q96DX8 246 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 NUS1Q96E22 293 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 DDX47Q9H0S4 455 aaKnown RBP14.57□□□□□ -0.08
SGCE-204ENST00000428696 LRRC40Q9H9A6 602 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 ZNF711Q9Y462 761 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 SPO11Q9Y5K1 396 aa14.57□□□□□ -0.08
SGCE-204ENST00000428696 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.56□□□□□ -0.08
SGCE-204ENST00000428696 A6NNZ2 444 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 VILLO15195 856 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 GDF9O60383 454 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 LRP3O75074 770 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 GAS8O95995 478 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 ATXN1LP0C7T5 689 aaKnown RBP14.56□□□□□ -0.08
SGCE-204ENST00000428696 HLA-DPA1P20036 260 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 THOP1P52888 689 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 GRIK2Q13002 908 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 ALS2CLQ60I27 953 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 GRK7Q8WTQ7 553 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 SPOCK2Q92563 424 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 CENPTQ96BT3 561 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 BMFQ96LC9 184 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 COQ10AQ96MF6 247 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 LENG8Q96PV6 779 aaPredicted RBP14.56□□□□□ -0.08
SGCE-204ENST00000428696 KLF6Q99612 283 aaPredicted RBP14.56□□□□□ -0.08
SGCE-204ENST00000428696 MAGEE1Q9HCI5 957 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 BPIFA1Q9NP55 256 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 GDF3Q9NR23 364 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 RXFP3Q9NSD7 469 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 OR1A2Q9Y585 309 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 HS3ST3A1Q9Y663 406 aa14.56□□□□□ -0.08
SGCE-204ENST00000428696 RIF1Q5UIP0 2472 aaKnown RBP14.55□□□□□ -0.08
SGCE-204ENST00000428696 CEP192Q8TEP8 1941 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 PLXND1Q9Y4D7 1925 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 LNP1A1A4G5 178 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 PDE2AO00408 941 aaPredicted RBP14.55□□□□□ -0.08
SGCE-204ENST00000428696 AURKAO14965 403 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 MAGEC1O60732 1142 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 ECEL1O95672 775 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 FGF1P05230 155 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 C1SP09871 688 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 ZNF30P17039 623 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 IGFALSP35858 605 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 STC1P52823 247 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 PDE1CQ14123 709 aaPredicted RBP14.55□□□□□ -0.08
SGCE-204ENST00000428696 SEPT6Q14141 434 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 CYP1B1Q16678 543 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 HLA-BQ31612 363 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 PEAR1Q5VY43 1037 aaPredicted RBP14.55□□□□□ -0.08
SGCE-204ENST00000428696 RAET1GQ6H3X3 334 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 C4orf22Q6V702 233 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 RANBP10Q6VN20 620 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 GCNT7Q6ZNI0 430 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 GLT6D1Q7Z4J2 308 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 TP53I13Q8NBR0 393 aaPredicted RBP14.55□□□□□ -0.08
SGCE-204ENST00000428696 PLA2G15Q8NCC3 412 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 ASB12Q8WXK4 309 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 SCAMP4Q969E2 229 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 AP2M1Q96CW1 435 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 SRPK1Q96SB4 655 aaKnown RBP14.55□□□□□ -0.08
SGCE-204ENST00000428696 EDEM2Q9BV94 578 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 GAREM1Q9H706 876 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 CAPN10Q9HC96 672 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 PKD2L2Q9NZM6 624 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 RNF14Q9UBS8 474 aa14.55□□□□□ -0.08
SGCE-204ENST00000428696 MOSPD1Q9UJG1 213 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms