RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CXorf40AQ8TE69 158 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 UBLCP1Q8WVY7 318 aaPredicted RBP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CAVIN3Q969G5 261 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 DNAJC1Q96KC8 554 aaKnown RBP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 LYSMD1Q96S90 227 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 KIFC1Q9BW19 673 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 TPSD1Q9BZJ3 242 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CDC42EP4Q9H3Q1 356 aaKnown RBP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 MRM3Q9HC36 420 aaKnown RBP7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 BPIFA1Q9NP55 256 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CD93Q9NPY3 652 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 CHRAC1Q9NRG0 131 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 NINJ2Q9NZG7 142 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 SLC2A6Q9UGQ3 507 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 KCTD3Q9Y597 815 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 TEX264Q9Y6I9 313 aa7.92□□□□□ -1.14
HMGA1P4-201ENST00000428643 FAM237BA0A1B0GVD1 139 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 MROH6A6NGR9 719 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 TSPAN6O43657 245 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 PLRG1O43660 514 aaKnown RBP7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 AP1G1O43747 822 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 LZTS3O60299 673 aaPredicted RBP7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 SPAG6O75602 509 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 RPP40O75818 363 aaKnown RBP7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 USP1O94782 785 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 PAPSS2O95340 614 aaPredicted RBP7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 C1SP09871 688 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 C6P13671 934 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 H2AFXP16104 143 aaPredicted RBP7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZNF30P17039 623 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 SSTR1P30872 391 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 STX2P32856 288 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 PHBP35232 272 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 HMGCLP35914 325 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 ETV3P41162 512 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 CLCN5P51795 746 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 TAS2R38P59533 333 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 PRAMEP78395 509 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 MSLNQ13421 630 aaPredicted RBP7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 PTPRCAPQ14761 206 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 CDKN3Q16667 212 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 SKIDA1Q1XH10 827 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 ANKRD20A4Q4UJ75 823 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 TMEM31Q5JXX7 168 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 SPANXN3Q5MJ09 141 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 STEAP4Q687X5 459 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 AFTPHQ6ULP2 937 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 HSD11B1LQ7Z5J1 315 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 RASSF3Q86WH2 238 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 RELL1Q8IUW5 271 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 OR4K2Q8NGD2 314 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 OR13C4Q8NGS5 318 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 OR6P1Q8NGX9 317 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 UHMK1Q8TAS1 419 aaKnown RBP7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 GSDMBQ8TAX9 411 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 STYXQ8WUJ0 223 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 MFSD3Q96ES6 412 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZNF778Q96MU6 729 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 SEMA4AQ9H3S1 761 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 PREBQ9HCU5 417 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 ARFGAP3Q9NP61 516 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 PPANQ9NQ55 473 aaKnown RBP7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 C20orf96Q9NUD7 363 aaPredicted RBP7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 PKD2L2Q9NZM6 624 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 DLGAP2Q9P1A6 1054 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 USP36Q9P275 1121 aaKnown RBP7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 FKBPLQ9UIM3 349 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 CYP8B1Q9UNU6 501 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 PPIL1Q9Y3C6 166 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 FADS3Q9Y5Q0 445 aa7.91□□□□□ -1.14
HMGA1P4-201ENST00000428643 A0A087WUV0 522 aaPredicted RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBC1D3DA0A087WVF3 549 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBC1D3IA0A087WXS9 549 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBC1D3EA0A087X179 549 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBC1D3KA0A087X1G2 549 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBC1D3FA6NER0 549 aaPredicted RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 IGLON5A6NGN9 336 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 LRRC72A6NJI9 287 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBC1D3LB9A6J9 549 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 H0Y858 1186 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 PSMD11O00231 422 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 WNT9AO14904 365 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 AXIN1O15169 862 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 RIPK2O43353 540 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 LAMTOR5O43504 91 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 MMP20O60882 483 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 RNGTTO60942 597 aaKnown RBP7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZNF217O75362 1048 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 VAPBO95292 243 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 PRAMEF1O95521 474 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 SEMA4FO95754 770 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 GSTA2P09210 222 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TBC1D3HP0C7X1 549 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 TSHRP16473 764 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 OXTRP30559 389 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 HSD17B3P37058 310 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 SPAM1P38567 509 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 HADHAP40939 763 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 ARSDP51689 593 aa7.9□□□□□ -1.14
HMGA1P4-201ENST00000428643 RPS21P63220 83 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms