RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 CDKN3Q16667 212 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 QPCTQ16769 361 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 LRRC66Q68CR7 880 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 DENND2CQ68D51 928 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 ESRP1Q6NXG1 681 aaKnown RBP16.7■□□□□ 0.26
VRK2-204ENST00000428021 PNCKQ6P2M8 343 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 Q6ZVL8 140 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 RAB44Q7Z6P3 723 aaPredicted RBP16.7■□□□□ 0.26
VRK2-204ENST00000428021 RBFAQ8N0V3 343 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 NDUFAF2Q8N183 169 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 ZNF548Q8NEK5 533 aaPredicted RBP16.7■□□□□ 0.26
VRK2-204ENST00000428021 LPCAT1Q8NF37 534 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 SPATA22Q8NHS9 363 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 ACTL9Q8TC94 416 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 FUBP1Q96AE4 644 aaKnown RBP16.7■□□□□ 0.26
VRK2-204ENST00000428021 NUS1Q96E22 293 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 HES6Q96HZ4 224 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 CNDP2Q96KP4 475 aaKnown RBP16.7■□□□□ 0.26
VRK2-204ENST00000428021 LYSMD1Q96S90 227 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 TSGA10Q9BZW7 698 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 C10orf88Q9H8K7 445 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 LRP4O75096 1905 aa16.7■□□□□ 0.26
VRK2-204ENST00000428021 AKAP13Q12802 2813 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 ANKRD66B4E2M5 251 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 ENC1O14682 589 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 SCAMP1O15126 338 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 MTSS1O43312 755 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 SIGLEC6O43699 453 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 HYAL3O43820 417 aaPredicted RBP16.69■□□□□ 0.26
VRK2-204ENST00000428021 MT-CYBP00156 380 aaPredicted RBP16.69■□□□□ 0.26
VRK2-204ENST00000428021 HOXC4P09017 264 aaPredicted RBP16.69■□□□□ 0.26
VRK2-204ENST00000428021 SPINK2P20155 84 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 OTUD4Q01804 1114 aaKnown RBP16.69■□□□□ 0.26
VRK2-204ENST00000428021 ARHGEF7Q14155 803 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 SLC14A2Q15849 920 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 PROX2Q3B8N5 592 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 KCTD16Q68DU8 428 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 ZNF662Q6ZS27 426 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 PHACTR4Q8IZ21 702 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 ZNF567Q8N184 647 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 CHCHD4Q8N4Q1 142 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 UBL4BQ8N7F7 174 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 OR4C6Q8NH72 309 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 HTR3CQ8WXA8 447 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 ADAMTS14Q8WXS8 1223 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 ANGPTL2Q9UKU9 493 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 GUCA1BQ9UMX6 200 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 APOBEC2Q9Y235 224 aaKnown RBP16.69■□□□□ 0.26
VRK2-204ENST00000428021 CHD8Q9HCK8 2581 aa16.69■□□□□ 0.26
VRK2-204ENST00000428021 GOLGA4Q13439 2230 aaKnown RBP16.68■□□□□ 0.26
VRK2-204ENST00000428021 H7C0C1 242 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 FFAR2O15552 330 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 KRT86O43790 486 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 GCATO75600 419 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 TJP3O95049 919 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 TRIM16O95361 564 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 C1SP09871 688 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 ZNF30P17039 623 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 NFKB1P19838 968 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 RBL1P28749 1068 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 ATP5OP48047 213 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 STC1P52823 247 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 KIAA1024LP59773 190 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 DNAJC3Q13217 504 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 GALNT3Q14435 633 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 ALG11Q2TAA5 492 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 CCDC181Q5TID7 509 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 ENPP7Q6UWV6 458 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 KDELC2Q7Z4H8 507 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 TSACCQ96A04 125 aaPredicted RBP16.68■□□□□ 0.26
VRK2-204ENST00000428021 FAM118BQ9BPY3 351 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 MLPHQ9BV36 600 aaPredicted RBP16.68■□□□□ 0.26
VRK2-204ENST00000428021 LGR4Q9BXB1 951 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 ABCG8Q9H221 673 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 KCTD5Q9NXV2 234 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 CSNK1G3Q9Y6M4 447 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 FRYQ5TBA9 3013 aa16.68■□□□□ 0.26
VRK2-204ENST00000428021 GOLGA6L3A6NEY3 463 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 TMEM202A6NGA9 273 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 H3BM21 787 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 AQP9O43315 295 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 CLDN7O95471 211 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 HTR1BP28222 390 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 CETN2P41208 172 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 EIF3EP60228 445 aaKnown RBP16.67■□□□□ 0.26
VRK2-204ENST00000428021 SRP54P61011 504 aaKnown RBP16.67■□□□□ 0.26
VRK2-204ENST00000428021 PPARDQ03181 441 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 CDK18Q07002 472 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 DPTQ07507 201 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 PCSK7Q16549 785 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 FAXCQ5TGI0 409 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 KDELC1Q6UW63 502 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 PID1Q7Z2X4 250 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 LMX1AQ8TE12 382 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 BTN2A2Q8WVV5 523 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 TBATAQ96M53 351 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 WDR92Q96MX6 357 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 VAT1Q99536 393 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 LRRC61Q9BV99 259 aa16.67■□□□□ 0.26
VRK2-204ENST00000428021 SCNM1Q9BWG6 230 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms