RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 MAGEE1Q9HCI5 957 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 HACD3Q9P035 362 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 FEZ2Q9UHY8 353 aaPredicted RBP9.16□□□□□ -0.94
SMC1A-203ENST00000428014 REXO2Q9Y3B8 237 aaKnown RBP9.16□□□□□ -0.94
SMC1A-203ENST00000428014 RAI2Q9Y5P3 530 aa9.16□□□□□ -0.94
SMC1A-203ENST00000428014 ACACAQ13085 2346 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 ANKRD66B4E2M5 251 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 ENC1O14682 589 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 RAD51BO15315 384 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 CST8O60676 142 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 MMP20O60882 483 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 NEBLO76041 1014 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 TJP3O95049 919 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 RASGRP1O95267 797 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 LDOC1O95751 146 aaPredicted RBP9.15□□□□□ -0.94
SMC1A-203ENST00000428014 FTH1P19P0C7X4 201 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 GIMD1P0DJR0 217 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 PNLIPP16233 465 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 NUMBP49757 651 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 HK3P52790 923 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 PDE1CQ14123 709 aaPredicted RBP9.15□□□□□ -0.94
SMC1A-203ENST00000428014 ARHGEF7Q14155 803 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 NOMO1Q15155 1222 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 ELOCQ15369 112 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 ZFYVE27Q5T4F4 411 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 PNCKQ6P2M8 343 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 LEKR1Q6ZMV7 388 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 PTAR1Q7Z6K3 402 aaPredicted RBP9.15□□□□□ -0.94
SMC1A-203ENST00000428014 NT5DC3Q86UY8 548 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 SLC25A45Q8N413 288 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 UBL4BQ8N7F7 174 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 CNTD1Q8N815 330 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 KDF1Q8NAX2 398 aaPredicted RBP9.15□□□□□ -0.94
SMC1A-203ENST00000428014 CCNYQ8ND76 341 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 ANKK1Q8NFD2 765 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 SETD7Q8WTS6 366 aaKnown RBP9.15□□□□□ -0.94
SMC1A-203ENST00000428014 SCG3Q8WXD2 468 aaKnown RBP9.15□□□□□ -0.94
SMC1A-203ENST00000428014 GLMNQ92990 594 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 NAT6Q93015 286 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 HES6Q96HZ4 224 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 FCRL5Q96RD9 977 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 TRIB3Q96RU7 358 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 RBM15Q96T37 977 aaKnown RBP eCLIP9.15□□□□□ -0.941e-7■□□□□ 8.2
SMC1A-203ENST00000428014 APOOQ9BUR5 198 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 BOCQ9BWV1 1114 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 TEX101Q9BY14 249 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 LACRTQ9GZZ8 138 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 PCDH9Q9HC56 1237 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 NT5MQ9NPB1 228 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 FSCN3Q9NQT6 498 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 TRNAU1APQ9NX07 287 aaKnown RBP9.15□□□□□ -0.94
SMC1A-203ENST00000428014 VPS18Q9P253 973 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 B4GALT6Q9UBX8 382 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 PCDHGC4Q9Y5F7 938 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 LRRK1Q38SD2 2015 aa9.15□□□□□ -0.94
SMC1A-203ENST00000428014 LOC285095A0A1B0GVY8 99 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 EME2A4GXA9 379 aaPredicted RBP9.14□□□□□ -0.95
SMC1A-203ENST00000428014 GOLGA6L9A6NEM1 432 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 CACNB4O00305 520 aaPredicted RBP9.14□□□□□ -0.95
SMC1A-203ENST00000428014 GIPC1O14908 333 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 AQP9O43315 295 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 RFPL3O75679 317 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 HLA-DQB2P05538 268 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 IVLP07476 585 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 MMP2P08253 660 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 MYCLP1P12525 358 aaPredicted RBP9.14□□□□□ -0.95
SMC1A-203ENST00000428014 GM2AP17900 193 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 RPIAP49247 311 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 ACADVLP49748 655 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 STC1P52823 247 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 FAM193AP78312 1265 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 SKOR1P84550 965 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 PPARDQ03181 441 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 EIF2B5Q13144 721 aaKnown RBP9.14□□□□□ -0.95
SMC1A-203ENST00000428014 MPP3Q13368 585 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 LRP8Q14114 963 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 IRF4Q15306 451 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 CNGA3Q16281 694 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 ARMC3Q5W041 872 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 IGF2-ASQ6U949 168 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 ADAMTSL4Q6UY14 1074 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 CCNI2Q6ZMN8 369 aaPredicted RBP9.14□□□□□ -0.95
SMC1A-203ENST00000428014 KIAA1328Q86T90 577 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 RFX6Q8HWS3 928 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 ZNF548Q8NEK5 533 aaPredicted RBP9.14□□□□□ -0.95
SMC1A-203ENST00000428014 OR2I1PQ8NGU4 316 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 HTR3CQ8WXA8 447 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 NUS1Q96E22 293 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 CNDP2Q96KP4 475 aaKnown RBP9.14□□□□□ -0.95
SMC1A-203ENST00000428014 NSMCE3Q96MG7 304 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 WDR92Q96MX6 357 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 QKIQ96PU8 341 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMC1A-203ENST00000428014 LGMNQ99538 433 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 MLPHQ9BV36 600 aaPredicted RBP9.14□□□□□ -0.95
SMC1A-203ENST00000428014 OSBPL8Q9BZF1 889 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 SLC13A1Q9BZW2 595 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 WDR26Q9H7D7 661 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 RMI1Q9H9A7 625 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 PHPT1Q9NRX4 125 aaPredicted RBP9.14□□□□□ -0.95
SMC1A-203ENST00000428014 GGT7Q9UJ14 662 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms