RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 LEFTY1O75610 366 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 IGSF6O95976 241 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 ACADMP11310 421 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 CA4P22748 312 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 HOXA6P31267 233 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 CD68P34810 354 aaPredicted RBP15.69■□□□□ 0.1
SHOX2-202ENST00000425436 SCNN1BP51168 640 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 GEMP55040 296 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 SESN2P58004 480 aaPredicted RBP15.69■□□□□ 0.1
SHOX2-202ENST00000425436 ITKQ08881 620 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 CDH17Q12864 832 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 TCF15Q12870 199 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 ZBTB17Q13105 803 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 SRSF5Q13243 272 aaKnown RBP15.69■□□□□ 0.1
SHOX2-202ENST00000425436 MTM1Q13496 603 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 CST6Q15828 149 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 RGS9BPQ6ZS82 235 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 PLPP6Q8IY26 295 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 CACNA2D3Q8IZS8 1091 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 TEX26Q8N6G2 289 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 DNAAF3Q8N9W5 541 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 PIP4K2CQ8TBX8 421 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 MGARPQ8TDB4 240 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 MZB1Q8WU39 189 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 VOPP1Q96AW1 172 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 NSMCE3Q96MG7 304 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 WASF2Q9Y6W5 498 aa15.69■□□□□ 0.1
SHOX2-202ENST00000425436 ASMTLO95671 621 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 POP4O95707 220 aaKnown RBP15.68■□□□□ 0.1
SHOX2-202ENST00000425436 C1QAP02745 245 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 DNTTP04053 509 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 HLA-DQB2P05538 268 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 MGAT1P26572 445 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 GRIA1P42261 906 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 SLC18A2Q05940 514 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 MPP2Q14168 576 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 EFTUD2Q15029 972 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHOX2-202ENST00000425436 HHATQ5VTY9 493 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 TIFABQ6ZNK6 161 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 YTHDF3Q7Z739 585 aaKnown RBP15.68■□□□□ 0.1
SHOX2-202ENST00000425436 SRLQ86TD4 932 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 FAM124AQ86V42 546 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 LONP2Q86WA8 852 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 BBS5Q8N3I7 341 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 FAM160A2Q8N612 972 aaPredicted RBP15.68■□□□□ 0.1
SHOX2-202ENST00000425436 CNTD1Q8N815 330 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 BANPQ8N9N5 519 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 GANCQ8TET4 914 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 PLCD4Q9BRC7 762 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 FBRSQ9HAH7 460 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 GLOD4Q9HC38 313 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 ITM2CQ9NQX7 267 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 ANKRD36A6QL64 1941 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 USP34Q70CQ2 3546 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 A0A1W2PPM1 405 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 KPNA3O00505 521 aaPredicted RBP15.68■□□□□ 0.1
SHOX2-202ENST00000425436 PIGNO95427 931 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 NFKB1P19838 968 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 TPMTP51580 245 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 NSUN2Q08J23 767 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHOX2-202ENST00000425436 ZNF528Q3MIS6 628 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 MARK2Q7KZI7 788 aaKnown RBP15.68■□□□□ 0.1
SHOX2-202ENST00000425436 PIGWQ7Z7B1 504 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 DSG4Q86SJ6 1040 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 PRPF39Q86UA1 669 aaKnown RBP15.68■□□□□ 0.1
SHOX2-202ENST00000425436 TMEM135Q86UB9 458 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 MPP5Q8N3R9 675 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 AADATQ8N5Z0 425 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 TMIEQ8NEW7 156 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 RABEP2Q9H5N1 569 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 NOD2Q9HC29 1040 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 ZSCAN32Q9NX65 697 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 FBXL12Q9NXK8 326 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 SERGEFQ9UGK8 458 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 CYP8B1Q9UNU6 501 aa15.68■□□□□ 0.1
SHOX2-202ENST00000425436 FAM237BA0A1B0GVD1 139 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 A0A1W2PP55 124 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 HRO43593 1189 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 SPAG7O75391 227 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 RNASEH2AO75792 299 aaKnown RBP15.67■□□□□ 0.1
SHOX2-202ENST00000425436 USP1O94782 785 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 KIAA0754O94854 1291 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 PRNPP04156 253 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 UGT2B4P06133 528 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 RAD51Q06609 339 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 MGAT5Q09328 741 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 ITIH4Q14624 930 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 LRRC14Q15048 493 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 USP39Q53GS9 565 aaKnown RBP15.67■□□□□ 0.1
SHOX2-202ENST00000425436 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.67■□□□□ 0.1
SHOX2-202ENST00000425436 WDR5BQ86VZ2 330 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 CAMK1DQ8IU85 385 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 LRRC34Q8IZ02 419 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 C4orf33Q8N1A6 199 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 HDDC3Q8N4P3 179 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 CCDC197Q8NCU1 140 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 OR52K1Q8NGK4 314 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 ACMSDQ8TDX5 336 aa15.67■□□□□ 0.1
SHOX2-202ENST00000425436 PTCD2Q8WV60 388 aaKnown RBP15.67■□□□□ 0.1
SHOX2-202ENST00000425436 NELL1Q92832 810 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms