RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 WDR36Q8NI36 951 aaKnown RBP13.02□□□□□ -0.33
VRK3-203ENST00000424804 TEKT4Q8WW24 435 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 GLMNQ92990 594 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 CCDC74AQ96AQ1 378 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 PDXPQ96GD0 296 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 LIN37Q96GY3 246 aaPredicted RBP13.02□□□□□ -0.33
VRK3-203ENST00000424804 CSPG4P5Q96PW8 444 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 TUBGCP5Q96RT8 1024 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 LGR4Q9BXB1 951 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 FGF22Q9HCT0 170 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 MRPL40Q9NQ50 206 aaKnown RBP13.02□□□□□ -0.33
VRK3-203ENST00000424804 ETNK2Q9NVF9 386 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 GULP1Q9UBP9 304 aa13.02□□□□□ -0.33
VRK3-203ENST00000424804 CCDC187A0A096LP49 1063 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 TTC24A2A3L6 582 aaPredicted RBP13.01□□□□□ -0.33
VRK3-203ENST00000424804 K7ENP7 123 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 PALMO75781 387 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 RECQL5O94762 991 aaPredicted RBP13.01□□□□□ -0.33
VRK3-203ENST00000424804 TNFSF15O95150 251 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 RASGRP1O95267 797 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 PCCBP05166 539 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 HOXC4P09017 264 aaPredicted RBP13.01□□□□□ -0.33
VRK3-203ENST00000424804 CD48P09326 243 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 CR2P20023 1033 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 HCAR3P49019 387 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 UCNP55089 124 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 RHDQ02161 417 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 VAC14Q08AM6 782 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 DPYSQ14117 519 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 GRM3Q14832 879 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 ELOCQ15369 112 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 SPA17Q15506 151 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 ODF2Q5BJF6 829 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 ESRP1Q6NXG1 681 aaKnown RBP13.01□□□□□ -0.33
VRK3-203ENST00000424804 INO80CQ6PI98 192 aaPredicted RBP13.01□□□□□ -0.33
VRK3-203ENST00000424804 RHOT2Q8IXI1 618 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 CCL4L1Q8NHW4 92 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 WDR48Q8TAF3 677 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 SPOCK2Q92563 424 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 WDR92Q96MX6 357 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 CINPQ9BW66 212 aaPredicted RBP13.01□□□□□ -0.33
VRK3-203ENST00000424804 SIRPGQ9P1W8 387 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 TFR2Q9UP52 801 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 GPR34Q9UPC5 381 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 HYOU1Q9Y4L1 999 aa13.01□□□□□ -0.33
VRK3-203ENST00000424804 SOWAHDA6NJG2 315 aa13□□□□□ -0.33
VRK3-203ENST00000424804 HTRA2O43464 458 aaPredicted RBP13□□□□□ -0.33
VRK3-203ENST00000424804 IPO7O95373 1038 aaKnown RBP13□□□□□ -0.33
VRK3-203ENST00000424804 MAP3K6O95382 1288 aa13□□□□□ -0.33
VRK3-203ENST00000424804 KRT7P08729 469 aa13□□□□□ -0.33
VRK3-203ENST00000424804 ALPIP09923 528 aa13□□□□□ -0.33
VRK3-203ENST00000424804 RBMS1P29558 406 aaKnown RBP13□□□□□ -0.33
VRK3-203ENST00000424804 SERPINB6P35237 376 aa13□□□□□ -0.33
VRK3-203ENST00000424804 MLLT3P42568 568 aaPredicted RBP13□□□□□ -0.33
VRK3-203ENST00000424804 BLKP51451 505 aa13□□□□□ -0.33
VRK3-203ENST00000424804 KIAA1024LP59773 190 aa13□□□□□ -0.33
VRK3-203ENST00000424804 ZFP36L1Q07352 338 aaKnown RBP13□□□□□ -0.33
VRK3-203ENST00000424804 IL10RBQ08334 325 aa13□□□□□ -0.33
VRK3-203ENST00000424804 SLC10A7Q0GE19 358 aa13□□□□□ -0.33
VRK3-203ENST00000424804 SPIDRQ14159 915 aa13□□□□□ -0.33
VRK3-203ENST00000424804 CFAP58Q5T655 872 aa13□□□□□ -0.33
VRK3-203ENST00000424804 DPPA4Q7L190 304 aa13□□□□□ -0.33
VRK3-203ENST00000424804 RD3Q7Z3Z2 195 aa13□□□□□ -0.33
VRK3-203ENST00000424804 C17orf82Q86X59 251 aaPredicted RBP13□□□□□ -0.33
VRK3-203ENST00000424804 NRROSQ86YC3 692 aa13□□□□□ -0.33
VRK3-203ENST00000424804 PGBD5Q8N414 524 aa13□□□□□ -0.33
VRK3-203ENST00000424804 ATPAF2Q8N5M1 289 aa13□□□□□ -0.33
VRK3-203ENST00000424804 LZTR1Q8N653 840 aa13□□□□□ -0.33
VRK3-203ENST00000424804 COQ10AQ96MF6 247 aa13□□□□□ -0.33
VRK3-203ENST00000424804 LRRN3Q9H3W5 708 aa13□□□□□ -0.33
VRK3-203ENST00000424804 LUC7LQ9NQ29 371 aaKnown RBP13□□□□□ -0.33
VRK3-203ENST00000424804 KLQ9UEF7 1012 aa13□□□□□ -0.33
VRK3-203ENST00000424804 LCMT1Q9UIC8 334 aa13□□□□□ -0.33
VRK3-203ENST00000424804 APPL1Q9UKG1 709 aa13□□□□□ -0.33
VRK3-203ENST00000424804 ST14Q9Y5Y6 855 aa13□□□□□ -0.33
VRK3-203ENST00000424804 LRRD1A4D1F6 860 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 D6RAR5 112 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 SPOPO43791 374 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 TNFP01375 233 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 RPLP0P05388 317 aaKnown RBP12.99□□□□□ -0.33
VRK3-203ENST00000424804 ITGA2BP08514 1039 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 HGFP14210 728 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 XPAP23025 273 aaPredicted RBP12.99□□□□□ -0.33
VRK3-203ENST00000424804 CCKBRP32239 447 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 UGT1A5P35504 534 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 NAP1L1P55209 391 aaKnown RBP12.99□□□□□ -0.33
VRK3-203ENST00000424804 B4GALNT1Q00973 533 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 SRSF6Q13247 344 aaKnown RBP12.99□□□□□ -0.33
VRK3-203ENST00000424804 DPYSL3Q14195 570 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 LY6DQ14210 128 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 HLTFQ14527 1009 aaKnown RBP eCLIP12.99□□□□□ -0.33
VRK3-203ENST00000424804 ZNF235Q14590 738 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 IHHQ14623 411 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 PTPRRQ15256 657 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 BROXQ5VW32 411 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 KIAA1614Q5VZ46 1190 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 ERAP2Q6P179 960 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 GKN2Q86XP6 184 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 MAP7D3Q8IWC1 876 aa12.99□□□□□ -0.33
VRK3-203ENST00000424804 OR56A4Q8NGH8 313 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms