RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 KCNJ8Q15842 424 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 PAGE2BQ5JRK9 111 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 OR13F1Q8NGS4 319 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 ANKRD49Q8WVL7 239 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 EDEM1Q92611 657 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 KCTD14Q9BQ13 255 aaPredicted RBP16.66■□□□□ 0.26
PKP4-204ENST00000421462 ADAMTS10Q9H324 1103 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 VRTNQ9H8Y1 702 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 GOLGA2P5Q9HBQ8 144 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 PRMT7Q9NVM4 692 aaPredicted RBP16.66■□□□□ 0.26
PKP4-204ENST00000421462 GFAPP14136 432 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 TKTP29401 623 aaKnown RBP16.66■□□□□ 0.26
PKP4-204ENST00000421462 CD151P48509 253 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 KCNC1P48547 511 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 CLCQ05315 142 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 NAPEPLDQ6IQ20 393 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 STRADAQ7RTN6 431 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 SFRP1Q8N474 314 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 ADAMTS16Q8TE57 1224 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 SDCCAG3Q96C92 435 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 TEPSINQ96N21 525 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 ALPK1Q96QP1 1244 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 DOK1Q99704 481 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 SLX1AQ9BQ83 275 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 FBXO5Q9UKT4 447 aa16.66■□□□□ 0.26
PKP4-204ENST00000421462 MAGEB16A2A368 324 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 I6L893 689 aaPredicted RBP16.65■□□□□ 0.26
PKP4-204ENST00000421462 NDUFB5O43674 189 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 CLASP2O75122 1294 aaKnown RBP16.65■□□□□ 0.26
PKP4-204ENST00000421462 SLC6A2P23975 617 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 HLCSP50747 726 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 AQP6Q13520 282 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 GPR158Q5T848 1215 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 BROXQ5VW32 411 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 ANKRD34AQ69YU3 496 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 RNF34Q969K3 372 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 MID1IP1Q9NPA3 183 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 RAD54BQ9Y620 910 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 TRIM64CA6NLI5 447 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 NOBOXO60393 691 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 MYO1DO94832 1006 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 PARNO95453 639 aaKnown RBP16.65■□□□□ 0.26
PKP4-204ENST00000421462 PABPC1P11940 636 aaKnown RBP16.65■□□□□ 0.26
PKP4-204ENST00000421462 GSK3BP49841 420 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 DIO3P55073 304 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 TNFAIP2Q03169 654 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 UGP2Q16851 508 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 PLA2G4EQ3MJ16 856 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 KCTD11Q693B1 232 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 PDZD4Q76G19 769 aaPredicted RBP16.65■□□□□ 0.26
PKP4-204ENST00000421462 CCDC80Q76M96 950 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 SLCO6A1Q86UG4 719 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 PIM3Q86V86 326 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 FBXO16Q8IX29 292 aaPredicted RBP16.65■□□□□ 0.26
PKP4-204ENST00000421462 SCAIQ8N9R8 606 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 ZFP90Q8TF47 636 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 LRRC58Q96CX6 371 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 MYRFLQ96LU7 910 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 GPR20Q99678 358 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 MED10Q9BTT4 135 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 FUNDC2Q9BWH2 189 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 SMARCAD1Q9H4L7 1026 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 ANAPC2Q9UJX6 822 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 SARDHQ9UL12 918 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 CRYL1Q9Y2S2 319 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 GIT1Q9Y2X7 761 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 FER1L6Q2WGJ9 1857 aa16.65■□□□□ 0.26
PKP4-204ENST00000421462 SOWAHBA6NEL2 793 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 ZNF487B1APH4 448 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 CLDN25C9JDP6 229 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 PIP5K1BO14986 540 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 DCLK1O15075 740 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 MBL2P11226 248 aaPredicted RBP16.64■□□□□ 0.25
PKP4-204ENST00000421462 HGFP14210 728 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 AKAP5P24588 427 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 ICAM3P32942 547 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 CXCL9Q07325 125 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 MEP1AQ16819 746 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 PKN3Q6P5Z2 889 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 CYHR1Q6ZMK1 362 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 SAPCD2Q86UD0 394 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 ZDHHC17Q8IUH5 632 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 HS3ST5Q8IZT8 346 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 PACRGLQ8N7B6 248 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 CHID1Q9BWS9 393 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 NDEL1Q9GZM8 345 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 ALG2Q9H553 416 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 DDIT4Q9NX09 232 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 SEPT3Q9UH03 358 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 TMED5Q9Y3A6 229 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 AXIN1O15169 862 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 GPX3P22352 226 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 TCEA1P23193 301 aaKnown RBP16.64■□□□□ 0.25
PKP4-204ENST00000421462 HADHAP40939 763 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 ATP6V0D1P61421 351 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 LIPEQ05469 1076 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 SF3B4Q15427 424 aaKnown RBP eCLIP16.64■□□□□ 0.252e-6■■■□□ 16.7
PKP4-204ENST00000421462 OTUD1Q5VV17 481 aaPredicted RBP16.64■□□□□ 0.25
PKP4-204ENST00000421462 DCBLD1Q8N8Z6 715 aa16.64■□□□□ 0.25
PKP4-204ENST00000421462 OR6P1Q8NGX9 317 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms