RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 AHSA2Q719I0 299 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 SPATA19Q7Z5L4 167 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 PRDM8Q9NQV8 689 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 PRKAB1Q9Y478 270 aa12.37□□□□□ -0.43
CLCN4-203ENST00000421085 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 BMP7P18075 431 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 SLC6A2P23975 617 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 TNFAIP8L3Q5GJ75 292 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 IRF2BP1Q8IU81 584 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 LENG9Q96B70 501 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 NODALQ96S42 347 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 CHCHD6Q9BRQ6 235 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 CD163L1Q9NR16 1453 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 FAM172BPA6NC97 362 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 CETPP11597 493 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 PSMD5Q16401 504 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 INSCQ1MX18 579 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 SLC9A9Q8IVB4 645 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 PJA1Q8NG27 643 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 OR4A15Q8NGL6 344 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 VWA7Q9Y334 891 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 DHRS7Q9Y394 339 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 A0A1W2PQ72 361 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 TCEA3O75764 348 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 CATP04040 527 aaKnown RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 SCN1BQ07699 218 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 XKR6Q5GH73 641 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 PPM1JQ5JR12 505 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 PIK3R6Q5UE93 754 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 LCN1P1Q5VSP4 162 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 HGSNATQ68CP4 663 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 IQSEC1Q6DN90 963 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 DOK6Q6PKX4 331 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 C11orf24Q96F05 449 aaPredicted RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 GFM1Q96RP9 751 aaKnown RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 TMEM109Q9BVC6 243 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 PORCNQ9H237 461 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 AIREO43918 545 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 FTH1P02794 183 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 RPN2P04844 631 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 CYP2A6P11509 494 aaPredicted RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 CKBP12277 381 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 ALDH4A1P30038 563 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 POLR2JP52435 117 aaKnown RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 ACSBG2Q5FVE4 666 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 CCNYL2Q5T2Q4 361 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 CERCAMQ5T4B2 595 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 SULT1C3Q6IMI6 304 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 GRPEL2Q8TAA5 225 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 SIPA1Q96FS4 1042 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 CENPNQ96H22 339 aaPredicted RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 MNTQ99583 582 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 COQ10BQ9H8M1 238 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 EXD2Q9NVH0 621 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 ZNF879B4DU55 563 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 PTPN1P18031 435 aaKnown RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 RPL4P36578 427 aaKnown RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 SLC39A12Q504Y0 691 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 INTS5Q6P9B9 1019 aaKnown RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 CNTD1Q8N815 330 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 LINGO1Q96FE5 620 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 TMEM134Q9H6X4 195 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 GPN1Q9HCN4 374 aaPredicted RBP12.36□□□□□ -0.43
CLCN4-203ENST00000421085 LGALS13Q9UHV8 139 aa12.36□□□□□ -0.43
CLCN4-203ENST00000421085 PSMD10O75832 226 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 PIRTP0C851 137 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 PRDX6P30041 224 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 ATP6V0D1P61421 351 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 TMEM161BQ8NDZ6 487 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 HDAC10Q969S8 669 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 RHOJQ9H4E5 214 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 DNAAF2Q9NVR5 837 aaKnown RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 E9PCH4 1651 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 TGFB3P10600 412 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 TRIM40Q6P9F5 258 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 GPR65Q8IYL9 337 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 AGBL3Q8NEM8 1001 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 CLHC1Q8NHS4 586 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 TOP1MTQ969P6 601 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 KCNS3Q9BQ31 491 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 DSN1Q9H410 356 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 ZFYVE1Q9HBF4 777 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 PCDHGA10Q9Y5H3 936 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 PTPRMP28827 1452 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 CCNYL3P0C7X3 344 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 PTGS2P35354 604 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 ADGRE1Q14246 886 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 SUZ12Q15022 739 aaKnown RBP12.35□□□□□ -0.43
CLCN4-203ENST00000421085 ADAMTSL2Q86TH1 951 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 TRAPPC5Q8IUR0 188 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 UBE2J2Q8N2K1 259 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 ANKRD52Q8NB46 1076 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 LRRC20Q8TCA0 184 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 TRMOQ9BU70 441 aa12.35□□□□□ -0.43
CLCN4-203ENST00000421085 RHBGQ9H310 441 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms