RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 ZNF280BQ86YH2 543 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 PHYKPLQ8IUZ5 450 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 CHERPQ8IWX8 916 aaKnown RBP8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 RHEBL1Q8TAI7 183 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 SH3RF2Q8TEC5 729 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 HDAC10Q969S8 669 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 PRICKLE1Q96MT3 831 aaPredicted RBP8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 TRIB3Q96RU7 358 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 ATOH8Q96SQ7 321 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 SH3GL3Q99963 347 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 ERVK-6Q9BXR3 956 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 ALG9Q9H6U8 611 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 ABCD2Q9UBJ2 740 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 PADI4Q9UM07 663 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 TRAF6Q9Y4K3 522 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 MRPL42Q9Y6G3 142 aaKnown RBP8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 ALPK3Q96L96 1907 aa8.74□□□□□ -1.01
TRIM49D1-201ENST00000420869 CENPFP49454 3210 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PRORSD1PA6NEY8 169 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 OR51F1A6NGY5 319 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 TXNDC9O14530 226 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 MRASO14807 208 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 SYN3O14994 580 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 NRP2O60462 931 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 RPP40O75818 363 aaKnown RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 SRP72O76094 671 aaKnown RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 MTHFD2P13995 350 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 ZNF26P17031 533 aaPredicted RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 GSTT1P30711 240 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 MSX2P35548 267 aaPredicted RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PBX3P40426 434 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 STC1P52823 247 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PLK1P53350 603 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PRAMEP78395 509 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 CDKL1Q00532 357 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 EFEMP1Q12805 493 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 DDR2Q16832 855 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 SDHAF4Q5VUM1 108 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 IL23RQ5VWK5 629 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 MFSD14CQ5VZR4 134 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 KANK2Q63ZY3 851 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 RAP1GAP2Q684P5 730 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PAOXQ6QHF9 649 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PTAR1Q7Z6K3 402 aaPredicted RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 RTN4RL1Q86UN2 441 aaPredicted RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PIM3Q86V86 326 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 RNF135Q8IUD6 432 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 FUNDC1Q8IVP5 155 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PCDH20Q8N6Y1 951 aaKnown RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 RNF148Q8N7C7 305 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 NAT14Q8WUY8 206 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 SLCO4A1Q96BD0 722 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 ROPN1LQ96C74 230 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PABPC5Q96DU9 382 aaKnown RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PHF21BQ96EK2 531 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 ZNF597Q96LX8 424 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 ZNF599Q96NL3 588 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 GPATCH1Q9BRR8 931 aaKnown RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 AARSD1Q9BTE6 412 aaKnown RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 MRPS26Q9BYN8 205 aaKnown RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 TRIM4Q9C037 500 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 POLR1EQ9GZS1 481 aaKnown RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 RBM38Q9H0Z9 239 aaKnown RBP8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 ZFYVE28Q9HCC9 887 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 COMMD8Q9NX08 183 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 EPS15L1Q9UBC2 864 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 KCTD3Q9Y597 815 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 PCDHB5Q9Y5E4 795 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 COMMD3-BMI1R4GMX3 469 aa8.73□□□□□ -1.01
TRIM49D1-201ENST00000420869 CCDC162PA2VCL2 907 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 CCL22O00626 93 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 MUSKO15146 869 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 CD3EAPO15446 510 aaKnown RBP8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 RAMP2O60895 175 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 CDK14O94921 469 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 RTN3O95197 1032 aaPredicted RBP8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 TNFAIP8O95379 198 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 MATN4O95460 622 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 VNN2O95498 520 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 GOT2P00505 430 aaKnown RBP8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 TFAP2AP05549 437 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 SLC10A3P09131 477 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 ZDHHC11BP0C7U3 371 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 HDCP19113 662 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 HOXD9P28356 352 aaPredicted RBP8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 SLC7A1P30825 629 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 GRK4P32298 578 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 ZNF140P52738 457 aaPredicted RBP8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 POLE2P56282 527 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 FAM189BP81408 668 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 TXNL4AP83876 142 aaKnown RBP8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 ITKQ08881 620 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 CRHR2Q13324 411 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 MTA1Q13330 715 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 POLD3Q15054 466 aaPredicted RBP8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 OR4D1Q15615 310 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 KCNA10Q16322 511 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 MGAT5BQ3V5L5 792 aa8.72□□□□□ -1.01
TRIM49D1-201ENST00000420869 SETMARQ53H47 684 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms