RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ATP13A3Q9H7F0 1226 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 POLR3BQ9NW08 1133 aaPredicted RBP20.99■□□□□ 0.95
GPC1-202ENST00000420138 HACD3Q9P035 362 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 PHTF1Q9UMS5 762 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 RPL26L1Q9UNX3 145 aaKnown RBP20.99■□□□□ 0.95
GPC1-202ENST00000420138 ARL2BPQ9Y2Y0 163 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 CAPN7Q9Y6W3 813 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 HEPACAM2A8MVW5 462 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 SAT1P21673 171 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 CDKN3Q16667 212 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 DPY19L3Q6ZPD9 716 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 EP400NLQ6ZTU2 488 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 TRPM8Q7Z2W7 1104 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 PCDH20Q8N6Y1 951 aaKnown RBP20.98■□□□□ 0.95
GPC1-202ENST00000420138 GABPB2Q8TAK5 448 aaPredicted RBP20.98■□□□□ 0.95
GPC1-202ENST00000420138 SORCS1Q8WY21 1168 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 ECHDC3Q96DC8 303 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 FAM83CQ9BQN1 747 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 CLEC1BQ9P126 229 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 ERVW-1Q9UQF0 538 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 ZNF711Q9Y462 761 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 MTCH2Q9Y6C9 303 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 C5orf42Q9H799 3197 aa20.98■□□□□ 0.95
GPC1-202ENST00000420138 A0A0J9YYE9 177 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 KLF11O14901 512 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 BIRC5O15392 142 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 TRBC1P01850 177 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 CLCN5P51795 746 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 EPHB1P54762 984 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 RAB10P61026 200 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 IRX4P78413 519 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 MESP2Q0VG99 397 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 ZNF460Q14592 562 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 TYSND1Q2T9J0 566 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 CARD16Q5EG05 197 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 CES5AQ6NT32 575 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 OTOAQ7RTW8 1153 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 SPNS2Q8IVW8 549 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 CENPLQ8N0S6 344 aaPredicted RBP20.97■□□□□ 0.95
GPC1-202ENST00000420138 GPATCH11Q8N954 259 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 FRS2Q8WU20 508 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 ELMO2Q96JJ3 720 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 NDNQ99608 321 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 OLFM1Q99784 485 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 EBF3Q9H4W6 596 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 CATSPERZQ9NTU4 200 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 CLDND1Q9NY35 253 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 OBP2AQ9NY56 170 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 IL17CQ9P0M4 197 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.97■□□□□ 0.95
GPC1-202ENST00000420138 STARD13Q9Y3M8 1113 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 TBX10O75333 385 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 ADH1CP00326 375 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 SLC4A1P02730 911 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 OGNP20774 298 aaKnown RBP20.97■□□□□ 0.95
GPC1-202ENST00000420138 CCNHP51946 323 aaPredicted RBP20.97■□□□□ 0.95
GPC1-202ENST00000420138 POU4F1Q01851 419 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 ATAT1Q5SQI0 421 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 TANGO2Q6ICL3 276 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 Q6ZVU0 165 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 RYBPQ8N488 228 aaPredicted RBP20.97■□□□□ 0.95
GPC1-202ENST00000420138 TMEM151AQ8N4L1 468 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 CYB5D2Q8WUJ1 264 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 TUBGCP5Q96RT8 1024 aa20.97■□□□□ 0.95
GPC1-202ENST00000420138 CPEB1Q9BZB8 566 aaKnown RBP20.97■□□□□ 0.95
GPC1-202ENST00000420138 H7C0S8 307 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 TULP3O75386 442 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 STMN1P16949 149 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 POLR2EP19388 210 aaKnown RBP20.96■□□□□ 0.95
GPC1-202ENST00000420138 SERPINA4P29622 427 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 DGKGP49619 791 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 DLX2Q07687 328 aaPredicted RBP20.96■□□□□ 0.95
GPC1-202ENST00000420138 PEX6Q13608 980 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 PCLAFQ15004 111 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 PTPRNQ16849 979 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 ACCSLQ4AC99 568 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 MRNIPQ6NTE8 343 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 ZNF549Q6P9A3 640 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 AFTPHQ6ULP2 937 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 RAPH1Q70E73 1250 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 LYSMD3Q7Z3D4 306 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 CHST14Q8NCH0 376 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 OR2A12Q8NGT7 310 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 BPIFA1Q9NP55 256 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 FKBPLQ9UIM3 349 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 CDH7Q9ULB5 785 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 ANKRD6Q9Y2G4 727 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 SLC27A6Q9Y2P4 619 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 DOCK8Q8NF50 2099 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 DENND4AQ7Z401 1863 aa20.96■□□□□ 0.95
GPC1-202ENST00000420138 TRIOBPQ9H2D6 2365 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 WASH3PC4AMC7 463 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 IGFBP4P22692 258 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 CRABP2P29373 138 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 HNF1BP35680 557 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 HMGCLP35914 325 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 SCTRP47872 440 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 STC1P52823 247 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 XIAPP98170 497 aa20.95■□□□□ 0.94
GPC1-202ENST00000420138 DLG1Q12959 904 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms