RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 VCPIP1Q96JH7 1222 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 PPP1R9BQ96SB3 815 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 PSMB7Q99436 277 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 CNPY3Q9BT09 278 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 EDEM2Q9BV94 578 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 XPO4Q9C0E2 1151 aaKnown RBP7.07□□□□□ -1.28
HMGN1-205ENST00000419378 CDIP1Q9H305 208 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 TSPY26PQ9H489 355 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 CAAP1Q9H8G2 361 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 IPPKQ9H8X2 491 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 SP110Q9HB58 689 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 TMEM74BQ9NUR3 256 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 PARVAQ9NVD7 372 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 EVLQ9UI08 416 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-205ENST00000419378 PILRBQ9UKJ0 227 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 CAPN11Q9UMQ6 739 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 MAPRE3Q9UPY8 281 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 NEU3Q9UQ49 428 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 COQ6Q9Y2Z9 468 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 SPEGQ15772 3267 aa7.07□□□□□ -1.28
HMGN1-205ENST00000419378 NUMA1Q14980 2115 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 A0A0D9SEW6 157 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 FITM1A5D6W6 292 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 MEI4A8MW99 385 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 FAM72CH0Y354 149 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 HYAL3O43820 417 aaPredicted RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 NRDCO43847 1150 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 SNAP91O60641 907 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 RNASEH1O60930 286 aaKnown RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 HPXP02790 462 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 FTLP02792 175 aaPredicted RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 FUCA1P04066 466 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 GYPCP04921 128 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 PLEKP08567 350 aaPredicted RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 MSL3P1P0C860 447 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 GZMAP12544 262 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 GRK2P25098 689 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 OR1E1P30953 314 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 ACSL1P33121 698 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 TRHRP34981 398 aaPredicted RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 GRK3P35626 688 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 GDNFP39905 211 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 NNMTP40261 264 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 PSMD8P48556 350 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 KRT83P78385 493 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 ZBED6P86452 979 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 MVKQ03426 396 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 MAMLD1Q13495 774 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 LRP8Q14114 963 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 ELAVL3Q14576 367 aaKnown RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 DLG2Q15700 870 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 CST6Q15828 149 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 STPG1Q5TH74 334 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 FAM72AQ5TYM5 149 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 FAM72DQ6L9T8 149 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 RWDD4Q6NW29 188 aaKnown RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 ZCCHC8Q6NZY4 707 aaKnown RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 GALNT18Q6P9A2 607 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 ZNF783Q6ZMS7 281 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 DGLUCYQ7Z3D6 616 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 TMC6Q7Z403 805 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 SLFN11Q7Z7L1 901 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 FAM72BQ86X60 149 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 MMAAQ8IVH4 418 aaKnown RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 DRC7Q8IY82 874 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 STK40Q8N2I9 435 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 SH2D3CQ8N5H7 860 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 NUP43Q8NFH3 380 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 CADM4Q8NFZ8 388 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 ZNF653Q96CK0 615 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 KCNJ15Q99712 375 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 RTKNQ9BST9 563 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 JAM3Q9BX67 310 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 GPR174Q9BXC1 333 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 MAGEB5Q9BZ81 275 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 PABPC3Q9H361 631 aaKnown RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 CNOT8Q9UFF9 292 aaKnown RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 OR12D3Q9UGF7 316 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 SERGEFQ9UGK8 458 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 VPS51Q9UID3 782 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 SCML1Q9UN30 329 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 HS3ST2Q9Y278 367 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 LUC7L2Q9Y383 392 aaKnown RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 CNOT1A5YKK6 2376 aaKnown RBP7.06□□□□□ -1.28
HMGN1-205ENST00000419378 CACNA1EQ15878 2313 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 PCDH15Q96QU1 1955 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 PI4KAP42356 2102 aa7.06□□□□□ -1.28
HMGN1-205ENST00000419378 hCG_2014768A0A024R1R8 64 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 ILVBLA1L0T0 632 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 TMEM191CA6NGB0 347 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 C22orf46C9J442 243 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 FAM47E-STBD1D6RA91 191 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 H7BY64 318 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 MID1O15344 667 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 PSPNO60542 156 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 RTN2O75298 545 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 RNASEH2AO75792 299 aaKnown RBP7.05□□□□□ -1.28
HMGN1-205ENST00000419378 SEMA4FO95754 770 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 MT-CO1P00395 513 aa7.05□□□□□ -1.28
HMGN1-205ENST00000419378 SERPING1P05155 500 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms