RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 NDUFS2O75306 463 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 GABBR2O75899 941 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 INMTO95050 263 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 UMPSP11172 480 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 SAT1P21673 171 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 PCMT1P22061 227 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 SLC6A2P23975 617 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ALDH3A2P51648 485 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 EN1Q05925 392 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 C6orf141Q5SZD1 244 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 FAM35AQ86V20 835 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ASCC1Q8N9N2 400 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 BEST2Q8NFU1 509 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 PSMA8Q8TAA3 256 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 DYNC2LI1Q8TCX1 351 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 P2RY11Q96G91 374 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 SLC30A3Q99726 388 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 OMDQ99983 421 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 BDH2Q9BUT1 245 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ZC3H12CQ9C0D7 883 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 RHOJQ9H4E5 214 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 POMKQ9H5K3 350 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 SPC25Q9HBM1 224 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 TNFRSF12AQ9NP84 129 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 FEM1BQ9UK73 627 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 NDUFAF1Q9Y375 327 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 MFHAS1Q9Y4C4 1052 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ANGPTL3Q9Y5C1 460 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 CRYZL1O95825 349 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 MTHFD1P11586 935 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 GPX3P22352 226 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 OLIG2Q13516 323 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 OTUD3Q5T2D3 398 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 CHDHQ8NE62 594 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ATL1Q8WXF7 558 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 TMEM176AQ96HP8 235 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 DACH2Q96NX9 599 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 SNX18Q96RF0 628 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 GBA2Q9HCG7 927 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 IARS2Q9NSE4 1012 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 BFARQ9NZS9 450 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ACOT9Q9Y305 439 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 PCDHGA8Q9Y5G5 932 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 SNX5Q9Y5X3 404 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 LCTP09848 1927 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 TAF4O00268 1085 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 SEC24AO95486 1093 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ALPLP05186 524 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 PSAPP07602 524 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 KRT19P08727 400 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 HOXC6P09630 235 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 THRBP10828 461 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 YWHAQP27348 245 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 AVPR1AP37288 418 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ACADSBP45954 432 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 GNG2P59768 71 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 SURF1Q15526 300 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 IMPG1Q17R60 797 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 DOK7Q18PE1 504 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 PYCR3Q53H96 274 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ZNF667Q5HYK9 610 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 RSBN1Q5VWQ0 802 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ZPBP2Q6X784 338 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 LARP4Q71RC2 724 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 PTRH1Q86Y79 214 aaKnown RBP8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 EXOC8Q8IYI6 725 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 SPERTQ8NA61 448 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 CPB2Q96IY4 423 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 MRIQ9BWK5 157 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 DSN1Q9H410 356 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 TMEM134Q9H6X4 195 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 ABCB10Q9NRK6 738 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 WDR90Q96KV7 1748 aa8.03□□□□□ -1.12
HMGXB4-202ENST00000418170 A0A0J9YYE9 177 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 ZNF99A8MXY4 864 aaPredicted RBP8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 CILPO75339 1184 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 PTTG1O95997 202 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 CHRNA1P02708 482 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 KRT8P05787 483 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 BMP1P13497 986 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 PTGER2P43116 358 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 YBX1P67809 324 aaKnown RBP8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 PIGFQ07326 219 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 DAG1Q14118 895 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 ZNF181Q2M3W8 571 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 ZNF484Q5JVG2 852 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 TMEM236Q5W0B7 351 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 SLC26A9Q7LBE3 791 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 ZBTB33Q86T24 672 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 ZNF567Q8N184 647 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 SIX5Q8N196 739 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 NXNL1Q96CM4 212 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 NODALQ96S42 347 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 PDCD2LQ9BRP1 358 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 ALOXE3Q9BYJ1 711 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 MAGEB5Q9BZ81 275 aa8.02□□□□□ -1.12
HMGXB4-202ENST00000418170 NR5A2O00482 541 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 CCNKO75909 580 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 DLGAP3O95886 979 aa8.02□□□□□ -1.13
HMGXB4-202ENST00000418170 MT-ND1P03886 318 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms