RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 D6RAR5 112 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 KDELR3O43731 214 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 KRT1P04264 644 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 KRT7P08729 469 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 ITIH1P19827 911 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 HCAR3P49019 387 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 DNA2P51530 1060 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 HADHBP55084 474 aaKnown RBP18.09■□□□□ 0.49
VCP-202ENST00000417448 SERINC3Q13530 473 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 GSE1Q14687 1217 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 ANKRD20A8PQ5CZ79 823 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 PRRT3Q5FWE3 981 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 HIST2H2BCQ6DN03 193 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 DAAM2Q86T65 1068 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 ZFAND4Q86XD8 727 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 FAM71BQ8TC56 605 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 CLPBQ9H078 707 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 DYRK4Q9NR20 520 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 APOBEC3BQ9UH17 382 aaKnown RBP18.09■□□□□ 0.49
VCP-202ENST00000417448 IPO11Q9UI26 975 aaKnown RBP18.09■□□□□ 0.49
VCP-202ENST00000417448 PADI4Q9UM07 663 aa18.09■□□□□ 0.49
VCP-202ENST00000417448 LRRK1Q38SD2 2015 aa18.08■□□□□ 0.49
VCP-202ENST00000417448 LRP4O75096 1905 aa18.08■□□□□ 0.49
VCP-202ENST00000417448 PRAMEF33A0A0G2JMD5 474 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 A0A1W2PQM1 296 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 C3orf70A6NLC5 250 aaPredicted RBP18.08■□□□□ 0.48
VCP-202ENST00000417448 LMO7DNF2Z398 122 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 NVLO15381 856 aaKnown RBP18.08■□□□□ 0.48
VCP-202ENST00000417448 PRAMEF10O60809 474 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 ZNF821O75541 412 aaPredicted RBP18.08■□□□□ 0.48
VCP-202ENST00000417448 CELA2BP08218 269 aaPredicted RBP18.08■□□□□ 0.48
VCP-202ENST00000417448 HTR7P34969 479 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 RPIAP49247 311 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 RPS21P63220 83 aaKnown RBP18.08■□□□□ 0.48
VCP-202ENST00000417448 CCDC15Q0P6D6 951 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 ARSIQ5FYB1 569 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 KIAA1161Q6NSJ0 714 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 KRT35Q92764 455 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 FOXJ2Q9P0K8 574 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 SPASTQ9UBP0 616 aa18.08■□□□□ 0.48
VCP-202ENST00000417448 GRID2IPA4D2P6 1211 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 AGRPO00253 132 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 YY2O15391 372 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 PRNPP04156 253 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 GKP32189 559 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 ETFBP38117 255 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 ETV5P41161 510 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 SLC1A1P43005 524 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 SERPINH1P50454 418 aaKnown RBP18.07■□□□□ 0.48
VCP-202ENST00000417448 YBEYP58557 167 aaPredicted RBP18.07■□□□□ 0.48
VCP-202ENST00000417448 PFN3P60673 137 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 CCL7P80098 99 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 KIF5AQ12840 1032 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 ATXN7L2Q5T6C5 722 aaPredicted RBP18.07■□□□□ 0.48
VCP-202ENST00000417448 AFMIDQ63HM1 303 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 RETSATQ6NUM9 610 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 C22orf39Q6P5X5 142 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 TMCO3Q6UWJ1 677 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 DTX1Q86Y01 620 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 RHOT1Q8IXI2 618 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 PQLC3Q8N755 202 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 OR6K2Q8NGY2 324 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 GLMNQ92990 594 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 CCDC74AQ96AQ1 378 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 GFM1Q96RP9 751 aaKnown RBP18.07■□□□□ 0.48
VCP-202ENST00000417448 TM6SF2Q9BZW4 377 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 RETREG1Q9H6L5 497 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 LCMT1Q9UIC8 334 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 HPCAL4Q9UM19 191 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 GUCA1BQ9UMX6 200 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 LOXL2Q9Y4K0 774 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 FADS3Q9Y5Q0 445 aa18.07■□□□□ 0.48
VCP-202ENST00000417448 BLACEA4D250 179 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 BTNL10A8MVZ5 291 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 FPGTO14772 594 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 MFSD11O43934 449 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 LEFTY1O75610 366 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 PALMO75781 387 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 JMJD7P0C870 316 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 ADRB3P13945 408 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 CCKBRP32239 447 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 NEK3P51956 506 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 NDST2P52849 883 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 PDK2Q15119 407 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 CYTH1Q15438 398 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 PARP15Q460N3 678 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 C11orf63Q6NUN7 778 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 MFSD7Q6UXD7 560 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 DPY19L3Q6ZPD9 716 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 B4GALNT4Q76KP1 1039 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 PHACTR4Q8IZ21 702 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 SDR16C5Q8N3Y7 309 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 ZSCAN1Q8NBB4 408 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 KYQ8NBH2 561 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 CCDC112Q8NEF3 446 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 BTN2A2Q8WVV5 523 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 STRADBQ9C0K7 418 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 KCNF1Q9H3M0 494 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 SEPT10Q9P0V9 454 aa18.06■□□□□ 0.48
VCP-202ENST00000417448 IL36AQ9UHA7 158 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms