RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 BPTFQ12830 3046 aa13.88□□□□□ -0.19
CHEK2-210ENST00000416671 RNF103-CHMP3A0A140T963 221 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 TRPC5OSA6NMA1 111 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 KCNK1O00180 336 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 CLOCKO15516 846 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 MYCP01106 439 aaPredicted RBP13.87□□□□□ -0.19
CHEK2-210ENST00000416671 CD52P31358 61 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 NANOGNBQ7Z5D8 188 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 LSMEM2Q8N112 164 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 PDPRQ8NCN5 879 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 SCYL1Q96KG9 808 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 TSNARE1Q96NA8 513 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 AGAP2Q99490 1192 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 PRDM12Q9H4Q4 367 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 ZFC3H1O60293 1989 aaKnown RBP13.87□□□□□ -0.19
CHEK2-210ENST00000416671 NUP205Q92621 2012 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 F8W810 466 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 MGEA5O60502 916 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 CLPXO76031 633 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 THPOP40225 353 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 BRCC3P46736 316 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 TMBIM6P55061 237 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 TIGD5Q53EQ6 642 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 FRA10AC1Q70Z53 315 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 SEPT8Q92599 483 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 ZNF669Q96BR6 464 aaPredicted RBP13.87□□□□□ -0.19
CHEK2-210ENST00000416671 CD320Q9NPF0 282 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 SFMBT1Q9UHJ3 866 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 STAP1Q9ULZ2 295 aa13.87□□□□□ -0.19
CHEK2-210ENST00000416671 RNF103O00237 685 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 EEF2KO00418 725 aaKnown RBP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 SDHDO14521 159 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 TIMM44O43615 452 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 CLIC3O95833 236 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 PSMB4P28070 264 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 MAPK10P53779 464 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 IFRD2Q12894 506 aaPredicted RBP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 TBCELQ5QJ74 424 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 EPHX4Q8IUS5 362 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 PELI3Q8N2H9 469 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 FAM110BQ8TC76 370 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 NT5C3BQ969T7 300 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 FBXL20Q96IG2 436 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 C9orf16Q9BUW7 83 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 DNAI2Q9GZS0 605 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 MUC3BQ9H195 1237 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 MRGBPQ9NV56 204 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 CROTQ9UKG9 612 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 MAGED2Q9UNF1 606 aaPredicted RBP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 AURKCQ9UQB9 309 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 TCAF1Q9Y4C2 921 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 MKI67P46013 3256 aaKnown RBP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 LSM1O15116 133 aaKnown RBP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 SRP72O76094 671 aaKnown RBP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 B3GAT3O94766 335 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 DDHD2O94830 711 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 PABPC1P11940 636 aaKnown RBP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 DAOAP59103 153 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 MPP1Q00013 466 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 FASTKQ14296 549 aaKnown RBP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 OXA1LQ15070 435 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 AGKQ53H12 422 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 TMCO5AQ8N6Q1 288 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 KCTD13Q8WZ19 329 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 ERLEC1Q96DZ1 483 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 MAELQ96JY0 434 aaKnown RBP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 TMEM209Q96SK2 561 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 CGREF1Q99674 301 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 LRRC40Q9H9A6 602 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 SPC25Q9HBM1 224 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 CCM2LQ9NUG4 571 aaPredicted RBP13.86□□□□□ -0.19
CHEK2-210ENST00000416671 DDIT4Q9NX09 232 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 TMEM181Q9P2C4 612 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 SUN2Q9UH99 717 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 TLK1Q9UKI8 766 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 ANKRD6Q9Y2G4 727 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 CPQQ9Y646 472 aa13.86□□□□□ -0.19
CHEK2-210ENST00000416671 HACD1B0YJ81 288 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 TMEM233B4DJY2 109 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 SBK3P0C264 359 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 HDCP19113 662 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 MATN1P21941 496 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 GLRBP48167 497 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 LAYNQ6UX15 382 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 OFCC1Q8IZS5 231 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 SLC7A5P1Q8MH63 180 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 TMEM151AQ8N4L1 468 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 ARL10Q8N8L6 244 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 KDM1BQ8NB78 822 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 OR13F1Q8NGS4 319 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 RAET1EQ8TD07 263 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 EFHD2Q96C19 240 aaPredicted RBP13.85□□□□□ -0.19
CHEK2-210ENST00000416671 SLC2A13Q96QE2 648 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 FTHL17Q9BXU8 183 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 MROQ9BYG7 248 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 NANOGQ9H9S0 305 aa13.85□□□□□ -0.19
CHEK2-210ENST00000416671 WDR6Q9NNW5 1121 aaKnown RBP13.85□□□□□ -0.19
CHEK2-210ENST00000416671 CCDC167Q9P0B6 97 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms