RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	PPP1R16A	Q96I34	528 aa		8.69	□□□□□ -1.02
NIF3L1-206	ENST00000416651	SPON2	Q9BUD6	331 aa		8.69	□□□□□ -1.02
NIF3L1-206	ENST00000416651	LGR4	Q9BXB1	951 aa		8.69	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ACP6	Q9NPH0	428 aa		8.69	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ST7	Q9NRC1	585 aa		8.69	□□□□□ -1.02
NIF3L1-206	ENST00000416651	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	8.69	□□□□□ -1.02
NIF3L1-206	ENST00000416651	SMC3	Q9UQE7	1217 aa		8.69	□□□□□ -1.02
NIF3L1-206	ENST00000416651	TACC2	O95359	2948 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	TRBV23OR9-2	A0A075B6M9	112 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	IGHV1OR21-1	A0A087WYE8	117 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	FAM170A	A1A519	330 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651		E5RJQ4	531 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	PDXK	O00764	312 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	INSIG1	O15503	277 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	POLR2D	O15514	142 aa	Known RBP	8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	NUDT21	O43809	227 aa	Known RBP	8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	KATNA1	O75449	491 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	RFPL1	O75677	317 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	TM7SF2	O76062	418 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	CBX6	O95503	412 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ECEL1	O95672	775 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	TNF	P01375	233 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	PCCB	P05166	539 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	NR2F2	P24468	414 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	MAP4	P27816	1152 aa	Known RBP	8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ACVRL1	P37023	503 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	STAT5A	P42229	794 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	GPD2	P43304	727 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	RPL34	P49207	117 aa	Known RBP	8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	SERPINH1	P50454	418 aa	Known RBP	8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ABHD18	Q0P651	414 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	CCDC15	Q0P6D6	951 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	C5orf22	Q49AR2	442 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	DCAF12	Q5T6F0	453 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	KRT39	Q6A163	491 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	TMEM270	Q6UE05	265 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ZNF438	Q7Z4V0	828 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	RYBP	Q8N488	228 aa	Predicted RBP	8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	AGBL5	Q8NDL9	886 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	FBXL13	Q8NEE6	735 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	OR6C4	Q8NGE1	309 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	TMEM174	Q8WUU8	243 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	MOCOS	Q96EN8	888 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	CEP63	Q96MT8	703 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	WDR92	Q96MX6	357 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ZNF212	Q9UDV6	495 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	CROT	Q9UKG9	612 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	FRMD4B	Q9Y2L6	1034 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	KCTD3	Q9Y597	815 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	RPS6KL1	Q9Y6S9	549 aa		8.68	□□□□□ -1.02
NIF3L1-206	ENST00000416651	DCHS2	Q6V1P9	2916 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	PVALEF	A0A1B0GWK0	134 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651		B4E171	279 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	KRIT1	O00522	736 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	HNRNPR	O43390	633 aa	Known RBP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	CLDN11	O75508	207 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	FBXO21	O94952	628 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	SNRPB2	P08579	225 aa	Known RBP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	NID1	P14543	1247 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	CSTF2	P33240	577 aa	Known RBP eCLIP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	DLST	P36957	453 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ADH7	P40394	386 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	TSPAN7	P41732	249 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	MXI1	P50539	228 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	BLK	P51451	505 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	PMS2	P54278	862 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	CDH4	P55283	916 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	KRTAP10-9	P60411	292 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	RPS18	P62269	152 aa	Known RBP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	KRT83	P78385	493 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	DNM1	Q05193	864 aa	Known RBP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	NME3	Q13232	169 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	CNGA2	Q16280	664 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	HIF1A	Q16665	826 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ZNF805	Q5CZA5	627 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	JMJD6	Q6NYC1	403 aa	Predicted RBP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ZNF517	Q6ZMY9	492 aa	Predicted RBP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	TTC7B	Q86TV6	843 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	NAGS	Q8N159	534 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	DCAF4L2	Q8NA75	395 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	TSEN2	Q8NCE0	465 aa	Known RBP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	GOLGA5	Q8TBA6	731 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	PCSK5	Q92824	1860 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	KIAA1143	Q96AT1	154 aa	Predicted RBP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	HSH2D	Q96JZ2	352 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	HSFY1	Q96LI6	401 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	CCDC114	Q96M63	670 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	C5orf34	Q96MH7	638 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	MAGEB5	Q9BZ81	275 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	FAM204A	Q9H8W3	233 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	ASF1B	Q9NVP2	202 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	DDIT4	Q9NX09	232 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	AKAP7	Q9P0M2	348 aa	Predicted RBP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	MOSPD1	Q9UJG1	213 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	SLC5A6	Q9Y289	635 aa		8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	TMEM184B	Q9Y519	407 aa	Predicted RBP	8.67	□□□□□ -1.02
NIF3L1-206	ENST00000416651	NIPBL	Q6KC79	2804 aa	eCLIP	8.66	□□□□□ -1.02
NIF3L1-206	ENST00000416651	RHPN2P1	A8MT19	583 aa		8.66	□□□□□ -1.02
NIF3L1-206	ENST00000416651	GM2A	P17900	193 aa		8.66	□□□□□ -1.02

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms