RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 SEMA3CQ99985 751 aa9.64□□□□□ -0.87
LINC01090-201ENST00000415357 C1QTNF7Q9BXJ2 289 aa9.64□□□□□ -0.87
LINC01090-201ENST00000415357 RBM22Q9NW64 420 aaKnown RBP eCLIP9.64□□□□□ -0.87
LINC01090-201ENST00000415357 SALL4Q9UJQ4 1053 aa9.64□□□□□ -0.87
LINC01090-201ENST00000415357 INTUQ9ULD6 942 aa9.64□□□□□ -0.87
LINC01090-201ENST00000415357 NEUROG3Q9Y4Z2 214 aa9.64□□□□□ -0.87
LINC01090-201ENST00000415357 PCDHA13Q9Y5I0 950 aa9.64□□□□□ -0.87
LINC01090-201ENST00000415357 HEY1Q9Y5J3 304 aa9.64□□□□□ -0.87
LINC01090-201ENST00000415357 TPRP12270 2363 aaKnown RBP9.64□□□□□ -0.87
LINC01090-201ENST00000415357 FAM149AA5PLN7 773 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 KCNK1O00180 336 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 SCAMP1O15126 338 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 MATN3O15232 486 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 SOCS5O75159 536 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 RECQL5O94762 991 aaPredicted RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 LCA5LO95447 670 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 CSF2P04141 144 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 HLA-DQB2P05538 268 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 PDHA1P08559 390 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 NME1P15531 152 aaKnown RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 CTPS1P17812 591 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 CYLC1P35663 651 aaPredicted RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 MARCKSL1P49006 195 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 THOP1P52888 689 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 HNRNPKP61978 463 aaKnown RBP eCLIP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 NIPAL4Q0D2K0 466 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 C1orf61Q13536 156 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 INPP5AQ14642 412 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 TCEAL1Q15170 157 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 CNGA3Q16281 694 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 DENND2CQ68D51 928 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 KCTD16Q68DU8 428 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 SLC9A4Q6AI14 798 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 TIGD7Q6NT04 549 aaPredicted RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 RAD9BQ6WBX8 426 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 TSPAN33Q86UF1 283 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 RFX6Q8HWS3 928 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 DCP2Q8IU60 420 aaKnown RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 RHOT1Q8IXI2 618 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 CCDC170Q8IYT3 715 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 PELI3Q8N2H9 469 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 CCNYQ8ND76 341 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 ACRBPQ8NEB7 543 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 ZNF548Q8NEK5 533 aaPredicted RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 OR4C6Q8NH72 309 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 ZNF775Q96BV0 537 aaPredicted RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 HDAC11Q96DB2 347 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 TSGA13Q96PP4 275 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 PANX2Q96RD6 677 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 LGMNQ99538 433 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 CEP41Q9BYV8 373 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 POLR1EQ9GZS1 481 aaKnown RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 REXO2Q9Y3B8 237 aaKnown RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 MSRB2Q9Y3D2 182 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 OR1A2Q9Y585 309 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 RAI2Q9Y5P3 530 aa9.63□□□□□ -0.87
LINC01090-201ENST00000415357 MAP1BP46821 2468 aaKnown RBP9.63□□□□□ -0.87
LINC01090-201ENST00000415357 TDRD6O60522 2096 aaKnown RBP9.62□□□□□ -0.87
LINC01090-201ENST00000415357 NPIPB15A6NHN6 443 aaPredicted RBP9.62□□□□□ -0.87
LINC01090-201ENST00000415357 K7ESM1 405 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 APOL1O14791 398 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 RFPL3O75679 317 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 NDUFA10O95299 355 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 PGLSO95336 258 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 JCHAINP01591 159 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 CELA2BP08218 269 aaPredicted RBP9.62□□□□□ -0.87
LINC01090-201ENST00000415357 ALPIP09923 528 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 KRT10P13645 584 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 CCNB1P14635 433 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 MX2P20592 715 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 LHCGRP22888 699 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 CCNCP24863 283 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 VIPR1P32241 457 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 SLC1A1P43005 524 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 HADHBP55084 474 aaKnown RBP9.62□□□□□ -0.87
LINC01090-201ENST00000415357 YPEL5P62699 121 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 POLR2LP62875 67 aaKnown RBP9.62□□□□□ -0.87
LINC01090-201ENST00000415357 ZBTB17Q13105 803 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 ACOX1Q15067 660 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 SPA17Q15506 151 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 ST3GAL2Q16842 350 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 DEFB133Q30KQ1 61 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 ODF2Q5BJF6 829 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 ARMC12Q5T9G4 340 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 LRRC38Q5VT99 294 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 MACC1Q6ZN28 852 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 RFLNAQ6ZTI6 216 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 LRRC49Q8IUZ0 686 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 CCDC13Q8IYE1 715 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 PHACTR4Q8IZ21 702 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 SPC24Q8NBT2 197 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 ARRDC2Q8TBH0 407 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 LMX1AQ8TE12 382 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 KRT35Q92764 455 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 TSACCQ96A04 125 aaPredicted RBP9.62□□□□□ -0.87
LINC01090-201ENST00000415357 FUBP1Q96AE4 644 aaKnown RBP9.62□□□□□ -0.87
LINC01090-201ENST00000415357 IFT43Q96FT9 208 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 APOOQ9BUR5 198 aa9.62□□□□□ -0.87
LINC01090-201ENST00000415357 LRRC61Q9BV99 259 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms