RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SERPINI2O75830 405 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 CDH5P33151 784 aaPredicted RBP20.46■□□□□ 0.87
AP1S3-205ENST00000415298 PCBP1Q15365 356 aaKnown RBP eCLIP20.46■□□□□ 0.87
AP1S3-205ENST00000415298 TBRG1Q3YBR2 411 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 ALFQ53S48 1182 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 LPGAT1Q92604 370 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 NRBF2Q96F24 287 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 ITGA11Q9UKX5 1188 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 STON1Q9Y6Q2 735 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 TRIP11Q15643 1979 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 DAB1O75553 588 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 SCO1O75880 301 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 DNAJB5O75953 348 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 IFNA16P05015 189 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 SSTR3P32745 418 aaPredicted RBP20.45■□□□□ 0.86
AP1S3-205ENST00000415298 NPY2RP49146 381 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 BFSP2Q13515 415 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 ZFP69Q49AA0 526 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 YIF1BQ5BJH7 314 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 TRIM72Q6ZMU5 477 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 UTS2BQ765I0 119 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 LACC1Q8IV20 430 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 IL12RB2Q99665 862 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 PKP2Q99959 881 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 POLR1BQ9H9Y6 1135 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 ALG13Q9NP73 1137 aaKnown RBP20.45■□□□□ 0.86
AP1S3-205ENST00000415298 POLE4Q9NR33 117 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 TMEM39AQ9NV64 488 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 EPHA3P29320 983 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 AXLP30530 894 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 GALCP54803 685 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 UBAP2LQ14157 1087 aaKnown RBP20.45■□□□□ 0.86
AP1S3-205ENST00000415298 SLC10A6Q3KNW5 377 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 ATAD3CQ5T2N8 411 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 SEL1L2Q5TEA6 688 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 RTN4RL1Q86UN2 441 aaPredicted RBP20.45■□□□□ 0.86
AP1S3-205ENST00000415298 PM20D2Q8IYS1 436 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 UBL4BQ8N7F7 174 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 SMG8Q8ND04 991 aaKnown RBP20.45■□□□□ 0.86
AP1S3-205ENST00000415298 FNIP1Q8TF40 1166 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 GANQ9H2C0 597 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 PPCSQ9HAB8 311 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 CYP4F11Q9HBI6 524 aa20.45■□□□□ 0.86
AP1S3-205ENST00000415298 GSNP06396 782 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 IVDP26440 423 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 TCTN1Q2MV58 587 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 TOR2AQ5JU69 321 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 FCRLBQ6BAA4 426 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 DEFB107AQ8IZN7 70 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 ZCCHC7Q8N3Z6 543 aaKnown RBP20.44■□□□□ 0.86
AP1S3-205ENST00000415298 SNX31Q8N9S9 440 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 OR6F1Q8NGZ6 308 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 SNX19Q92543 992 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 SCYL1Q96KG9 808 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 KLK14Q9P0G3 267 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 TBX21Q9UL17 535 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 SNX7Q9UNH6 387 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 PITPNM1O00562 1244 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 TNNI1P19237 187 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 FMO5P49326 533 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 SLC12A2P55011 1212 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 NRF1Q16656 503 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 NUDCD3Q8IVD9 361 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 DBF4BQ8NFT6 615 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 OR5B17Q8NGF7 314 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 RAB2BQ8WUD1 216 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 ADAM2Q99965 735 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 TTPALQ9BTX7 342 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 PRDM5Q9NQX1 630 aaPredicted RBP20.44■□□□□ 0.86
AP1S3-205ENST00000415298 IPPQ9Y573 584 aa20.44■□□□□ 0.86
AP1S3-205ENST00000415298 LACTBL1A8MY62 500 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 RAD51BO15315 384 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 SPOPO43791 374 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 KCNH1O95259 989 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 CLTBP09497 229 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 ACTN1P12814 892 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 SLC9A1P19634 815 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 LRPAP1P30533 357 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 CDH26Q8IXH8 852 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 PARP8Q8N3A8 854 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 HTRA1Q92743 480 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 TRIM43Q96BQ3 446 aaPredicted RBP20.43■□□□□ 0.86
AP1S3-205ENST00000415298 PWWP2AQ96N64 755 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 TMEM117Q9H0C3 514 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 LRRC19Q9H756 370 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 RPF1Q9H9Y2 349 aaKnown RBP20.43■□□□□ 0.86
AP1S3-205ENST00000415298 MRPL40Q9NQ50 206 aaKnown RBP20.43■□□□□ 0.86
AP1S3-205ENST00000415298 BOLA1Q9Y3E2 137 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 NOS1APO75052 506 aaPredicted RBP20.43■□□□□ 0.86
AP1S3-205ENST00000415298 CDK14O94921 469 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 RGS7P49802 495 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 MRPS22P82650 360 aaKnown RBP20.43■□□□□ 0.86
AP1S3-205ENST00000415298 NAB1Q13506 487 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 MGAT5BQ3V5L5 792 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 TTC33Q6PID6 262 aaPredicted RBP20.43■□□□□ 0.86
AP1S3-205ENST00000415298 SYDE1Q6ZW31 735 aaPredicted RBP20.43■□□□□ 0.86
AP1S3-205ENST00000415298 DEFB128Q7Z7B8 93 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 FAM47BQ8NA70 645 aa20.43■□□□□ 0.86
AP1S3-205ENST00000415298 TP53I13Q8NBR0 393 aaPredicted RBP20.43■□□□□ 0.86
AP1S3-205ENST00000415298 LPPQ93052 612 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms