RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 H0Y626 953 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 TK2O00142 265 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 ADAM12O43184 909 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 PEX11AO75192 247 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 FKBP6O75344 327 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 IPO13O94829 963 aaKnown RBP13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 GJB5O95377 273 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 PYGLP06737 847 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 CCDC166P0CW27 439 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 TPBGLP0DKB5 382 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 PFKLP17858 780 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 HOXD9P28356 352 aaPredicted RBP13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 GCKP35557 465 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 MAPK8P45983 427 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 IRX1P78414 480 aaPredicted RBP13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 HERC3Q15034 1050 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 MAPRE2Q15555 327 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 TECRLQ5HYJ1 363 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 C16orf89Q6UX73 402 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 TRIM67Q6ZTA4 783 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 OTOP2Q7RTS6 562 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 TMEM173Q86WV6 379 aaPredicted RBP13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 HOMEZQ8IX15 550 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 TMEM151AQ8N4L1 468 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 CPSF7Q8N684 471 aaKnown RBP13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 ACVR1CQ8NER5 493 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 OR7D4Q8NG98 312 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 RP9Q8TA86 221 aaKnown RBP13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 TTC1Q99614 292 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 POMKQ9H5K3 350 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 CERS4Q9HA82 394 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 IL23AQ9NPF7 189 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 IGSF5Q9NSI5 407 aa13.51□□□□□ -0.25
SSR4P1-201ENST00000415143 USP34Q70CQ2 3546 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 RGSL1A5PLK6 1076 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 H3BNC9 293 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 NDUFS3O75489 264 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 LUC7L3O95232 432 aaKnown RBP13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 SEC24AO95486 1093 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 GOT2P00505 430 aaKnown RBP13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 FGBP02675 491 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 RPL17P18621 184 aaKnown RBP13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 LPOP22079 712 aaPredicted RBP13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 FDXRP22570 491 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 GLDCP23378 1020 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 PSMA3P25788 255 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 SCNN1BP51168 640 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 ATP6V0D1P61421 351 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 AP2B1P63010 937 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 USP4Q13107 963 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 UBAP2LQ14157 1087 aaKnown RBP13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 NAA25Q14CX7 972 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 TCTN1Q2MV58 587 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 RNF219Q5W0B1 726 aaPredicted RBP13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 RETSATQ6NUM9 610 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 NAPRTQ6XQN6 538 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 GLT6D1Q7Z4J2 308 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 ELMOD1Q8N336 334 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 CEP70Q8NHQ1 597 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 JADE3Q92613 823 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 PRR11Q96HE9 360 aaPredicted RBP13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 UBXN10Q96LJ8 280 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 TBATAQ96M53 351 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 PHOX2BQ99453 314 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 C19orf43Q9BQ61 176 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 THTPAQ9BU02 230 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 KCNH6Q9H252 994 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 MRPL40Q9NQ50 206 aaKnown RBP13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 PFDN4Q9NQP4 134 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 HCSTQ9UBK5 93 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 NUMBLQ9Y6R0 609 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 CFAP54Q96N23 3096 aa13.5□□□□□ -0.25
SSR4P1-201ENST00000415143 DOCK4Q8N1I0 1966 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 CXorf51AA0A1B0GTR3 108 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 CCDC162PA2VCL2 907 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 CBX4O00257 560 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 PSMG1O95456 288 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 SBK3P0C264 359 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 COX4I1P13073 169 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 POU3F3P20264 500 aaPredicted RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 IMPDH1P20839 514 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 CD9P21926 228 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 MPSTP25325 297 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 CPA2P48052 419 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 TTPAP49638 278 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 NUMBP49757 651 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 RPL26P61254 145 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 AP1S1P61966 158 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 RPS24P62847 133 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 NFKB2Q00653 900 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 SLC34A1Q06495 639 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 RAD51Q06609 339 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 TWF1Q12792 350 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 KLF10Q13118 480 aa13.49□□□□□ -0.25
SSR4P1-201ENST00000415143 PDAP1Q13442 181 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms