RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 LHCGRP22888 699 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 STX2P32856 288 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 ARCN1P48444 511 aaKnown RBP14.26□□□□□ -0.13
SF3B1-204ENST00000414963 STC1P52823 247 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 FAM193AP78312 1265 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 PTSQ03393 145 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 AGBL4Q5VU57 503 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 ALS2CLQ60I27 953 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 LRRC66Q68CR7 880 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 CES3Q6UWW8 571 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 TSPAN33Q86UF1 283 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 HDDC3Q8N4P3 179 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 ZNF669Q96BR6 464 aaPredicted RBP14.26□□□□□ -0.13
SF3B1-204ENST00000414963 ACSS3Q9H6R3 686 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 VIPAS39Q9H9C1 493 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 VPS37BQ9H9H4 285 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 FBXL12Q9NXK8 326 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 FETUBQ9UGM5 382 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 SLC2A6Q9UGQ3 507 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 RABGEF1Q9UJ41 708 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 FZD4Q9ULV1 537 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 FADS3Q9Y5Q0 445 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 NFS1Q9Y697 457 aa14.26□□□□□ -0.13
SF3B1-204ENST00000414963 TRIOO75962 3097 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 BDP1A6H8Y1 2624 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 TCRBV21S2A2A0A5A6 115 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 FAM159BA6NKW6 160 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 STK25O00506 426 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 STX7O15400 261 aaKnown RBP14.25□□□□□ -0.13
SF3B1-204ENST00000414963 TSPAN6O43657 245 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 TCEA3O75764 348 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 RPP40O75818 363 aaKnown RBP14.25□□□□□ -0.13
SF3B1-204ENST00000414963 IGLV3-19P01714 112 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 NDUFV2P19404 249 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 ARNTP27540 789 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 HADHAP40939 763 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 TAS2R38P59533 333 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 CREB5Q02930 508 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 ARHGEF7Q14155 803 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 STAT4Q14765 748 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 LONRF1Q17RB8 773 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 TTC31Q49AM3 519 aaPredicted RBP14.25□□□□□ -0.13
SF3B1-204ENST00000414963 ZDHHC20Q5W0Z9 365 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 PDPK2PQ6A1A2 396 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 TRMT10BQ6PF06 316 aaKnown RBP14.25□□□□□ -0.13
SF3B1-204ENST00000414963 LRIG3Q6UXM1 1119 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 LIPIQ6XZB0 460 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 KBTBD6Q86V97 674 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 OR4K2Q8NGD2 314 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 DTX3LQ8TDB6 740 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 FBF1Q8TES7 1133 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 ERLEC1Q96DZ1 483 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 CERS2Q96G23 380 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 CDKN2AIPNLQ96HQ2 116 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 CYTH2Q99418 400 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 OMDQ99983 421 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 TMEM109Q9BVC6 243 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 CDH19Q9H159 772 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 KDM4CQ9H3R0 1056 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 ITM2CQ9NQX7 267 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 POLR3BQ9NW08 1133 aaPredicted RBP14.25□□□□□ -0.13
SF3B1-204ENST00000414963 ZNF446Q9NWS9 450 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 DLGAP2Q9P1A6 1054 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 NFKBIL1Q9UBC1 381 aaPredicted RBP14.25□□□□□ -0.13
SF3B1-204ENST00000414963 PKP3Q9Y446 797 aa14.25□□□□□ -0.13
SF3B1-204ENST00000414963 A0A0U1RQS6 177 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 A0A1W2PP55 124 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 PLK4O00444 970 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 MAP2K7O14733 419 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 ATP8B1O43520 1251 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 RNASEH2AO75792 299 aaKnown RBP14.24□□□□□ -0.13
SF3B1-204ENST00000414963 VAPBO95292 243 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 ARSDP51689 593 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 EIF3BP55884 814 aaKnown RBP14.24□□□□□ -0.13
SF3B1-204ENST00000414963 MGAT5Q09328 741 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 LRRC73Q5JTD7 316 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 NEK5Q6P3R8 708 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.24□□□□□ -0.13
SF3B1-204ENST00000414963 RASSF3Q86WH2 238 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 LMNTD2Q8IXW0 634 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 CAMKK1Q8N5S9 505 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 OR13C4Q8NGS5 318 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 SCG3Q8WXD2 468 aaKnown RBP14.24□□□□□ -0.13
SF3B1-204ENST00000414963 HDAC10Q969S8 669 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 PBXIP1Q96AQ6 731 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 DNAJC1Q96KC8 554 aaKnown RBP14.24□□□□□ -0.13
SF3B1-204ENST00000414963 TBATAQ96M53 351 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 CCDC77Q9BR77 488 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 SLC6A17Q9H1V8 727 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 MFSD1Q9H3U5 465 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 PPCSQ9HAB8 311 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 RAD18Q9NS91 495 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 C2orf42Q9NWW7 574 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 USP36Q9P275 1121 aaKnown RBP14.24□□□□□ -0.13
SF3B1-204ENST00000414963 SERGEFQ9UGK8 458 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 NCKAP1Q9Y2A7 1128 aa14.24□□□□□ -0.13
SF3B1-204ENST00000414963 CCDC78A2IDD5 438 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 CCDC162PA2VCL2 907 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 A8MX80 341 aa14.23□□□□□ -0.13
SF3B1-204ENST00000414963 PLRG1O43660 514 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms