RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 SLC6A3Q01959 620 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 VGLL4Q14135 290 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 ZNF549Q6P9A3 640 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 TBX5Q99593 518 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 CST11Q9H112 138 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 CTPS2Q9NRF8 586 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 ZSCAN5BA6NJL1 495 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 GPR89AB7ZAQ6 455 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 H7C0S8 307 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 GPR89BP0CG08 455 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 SLC6A2P23975 617 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 RABGGTBP53611 331 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 ADHFE1Q8IWW8 467 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 DCBLD1Q8N8Z6 715 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 RP9Q8TA86 221 aaKnown RBP18.5■□□□□ 0.55
SHANK3-202ENST00000414786 CHID1Q9BWS9 393 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 MTFR1LQ9H019 292 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 ERGIC3Q9Y282 383 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 SAP18O00422 153 aaKnown RBP18.5■□□□□ 0.55
SHANK3-202ENST00000414786 LGALS2P05162 132 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 PTPRAP18433 802 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 RPL22P35268 128 aaKnown RBP18.5■□□□□ 0.55
SHANK3-202ENST00000414786 HSPB3Q12988 150 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 USP4Q13107 963 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 MSLNQ13421 630 aaPredicted RBP18.5■□□□□ 0.55
SHANK3-202ENST00000414786 ELOAQ14241 798 aaKnown RBP18.5■□□□□ 0.55
SHANK3-202ENST00000414786 SBK1Q52WX2 424 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 XKR4Q5GH76 650 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 FAM183BPQ6ZVS7 135 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 FBXO25Q8TCJ0 367 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 DPYSL5Q9BPU6 564 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 IQSEC2Q5JU85 1478 aa18.5■□□□□ 0.55
SHANK3-202ENST00000414786 FAM172BPA6NC97 362 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 J3QRK9 145 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 CD44P16070 742 aaKnown RBP18.49■□□□□ 0.55
SHANK3-202ENST00000414786 CCZ1BP86790 482 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 CCZ1P86791 482 aaPredicted RBP18.49■□□□□ 0.55
SHANK3-202ENST00000414786 SPIRE1Q08AE8 756 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 QPRTQ15274 297 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 HFE2Q6ZVN8 426 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 MEIOBQ8N635 442 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 PDE2AO00408 941 aaPredicted RBP18.49■□□□□ 0.55
SHANK3-202ENST00000414786 PGAM2P15259 253 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 BRCC3P46736 316 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 SNRPFP62306 86 aaKnown RBP18.49■□□□□ 0.55
SHANK3-202ENST00000414786 SP2Q02086 613 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 PRMT9Q6P2P2 845 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 C12orf29Q8N999 325 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 ADAMTS15Q8TE58 950 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 CHIAQ9BZP6 476 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 ALG2Q9H553 416 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 PROSCO94903 275 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 LINGO3P0C6S8 592 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 CCNB1P14635 433 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 PRKCHP24723 683 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 C2orf27AQ580R0 203 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 HMGB4Q8WW32 186 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 COX4I2Q96KJ9 171 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 CAPN6Q9Y6Q1 641 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 JCADQ9P266 1359 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 A0A0G2JN53 185 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 E2F3O00716 465 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 EIF1AYO14602 144 aaKnown RBP18.49■□□□□ 0.55
SHANK3-202ENST00000414786 CNTFP26441 200 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 TGFBR2P37173 567 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 PLEKHG4BQ96PX9 1271 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 PABPC3Q9H361 631 aaKnown RBP18.49■□□□□ 0.55
SHANK3-202ENST00000414786 NMUR1Q9HB89 426 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 PDP2Q9P2J9 529 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 GRIP1Q9Y3R0 1128 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 F8VP50 259 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 HGFP14210 728 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 RPL21P46778 160 aaKnown RBP18.49■□□□□ 0.55
SHANK3-202ENST00000414786 MRPS6P82932 125 aaKnown RBP18.49■□□□□ 0.55
SHANK3-202ENST00000414786 DUPD1Q68J44 220 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 KCTD4Q8WVF5 259 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 AP2M1Q96CW1 435 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 TAPBPLQ9BX59 468 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 RFXANKO14593 260 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 PGRMC2O15173 223 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 CYP1A1P04798 512 aaPredicted RBP18.49■□□□□ 0.55
SHANK3-202ENST00000414786 PURAQ00577 322 aaKnown RBP18.49■□□□□ 0.55
SHANK3-202ENST00000414786 HSF2Q03933 536 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 TAPT1Q6NXT6 567 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 SLAIN1Q8ND83 568 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 SLC47A1Q96FL8 570 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 OR52E6Q96RD3 313 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 GORASP1Q9BQQ3 440 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 SEMA4AQ9H3S1 761 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 SEMA6BQ9H3T3 888 aa18.49■□□□□ 0.55
SHANK3-202ENST00000414786 FADS2O95864 444 aaKnown RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 CYB5AP00167 134 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 TIE1P35590 1138 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 TSPAN5P62079 268 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 SCN1BQ07699 218 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 PUM1Q14671 1186 aaKnown RBP eCLIP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 OXNAD1Q96HP4 312 aaPredicted RBP18.48■□□□□ 0.55
SHANK3-202ENST00000414786 C17orf75Q9HAS0 396 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 ACP6Q9NPH0 428 aa18.48■□□□□ 0.55
SHANK3-202ENST00000414786 MYRFQ9Y2G1 1151 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms