RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 SEPT6Q14141 434 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 KRT81Q14533 505 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 PRRT3Q5FWE3 981 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 MS4A13Q5J8X5 152 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 PAPD7Q5XG87 772 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 KIAA1161Q6NSJ0 714 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 VSIG1Q86XK7 387 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 APCDD1Q8J025 514 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 SDR16C5Q8N3Y7 309 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 IL22RA1Q8N6P7 574 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 TEX19Q8NA77 164 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 EXD1Q8NHP7 514 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 ZNF592Q92610 1267 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 NKD1Q969G9 470 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 ABHD17AQ96GS6 310 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 RBM41Q96IZ5 413 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 TLR10Q9BXR5 811 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 CARD9Q9H257 536 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 LRRN3Q9H3W5 708 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 DONSONQ9NYP3 566 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 FZD10Q9ULW2 581 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 FARP1Q9Y4F1 1045 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 SAR1BQ9Y6B6 198 aa13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 TDRD6O60522 2096 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-204ENST00000414781 A0A1W2PQM1 296 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 POM121BA6NF01 834 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 FPGTO14772 594 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 ATP9BO43861 1147 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 PRKCGP05129 697 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 ETV5P41161 510 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 PEX5P50542 639 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 MLLT10P55197 1068 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 RPS21P63220 83 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 PTK2BQ14289 1009 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 ACCSLQ4AC99 568 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 OTUD1Q5VV17 481 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 SEL1L3Q68CR1 1132 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 NADSYN1Q6IA69 706 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 LVRNQ6Q4G3 990 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 LRRC31Q6UY01 552 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 SRRM1Q8IYB3 904 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 APOBEC4Q8WW27 367 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 HSPH1Q92598 858 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 FCRL2Q96LA5 508 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 CCDC114Q96M63 670 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 MAK16Q9BXY0 300 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 SLC17A9Q9BYT1 436 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 SLC13A1Q9BZW2 595 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 PRDM8Q9NQV8 689 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 RCOR3Q9P2K3 495 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 RNF14Q9UBS8 474 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 SLC25A13Q9UJS0 675 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 SNX12Q9UMY4 172 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 AP4E1Q9UPM8 1137 aa13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 ZFR2Q9UPR6 939 aaKnown RBP13.64□□□□□ -0.23
RAPGEF1-204ENST00000414781 NYNRINQ9P2P1 1898 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 LRRD1A4D1F6 860 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 ZNF487B1APH4 448 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 KPNA3O00505 521 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 YY2O15391 372 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 DDX3YO15523 660 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 GCATO75600 419 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 KRT1P04264 644 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 ATP1A1P05023 1023 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 LIFP15018 202 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 IL1R2P27930 398 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 L1CAMP32004 1257 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 GJC1P36383 396 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 ARL4AP40617 200 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 HCAR3P49019 387 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 PLK1P53350 603 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 EIF2B5Q13144 721 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 DPYSL2Q16555 572 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 SEL1L2Q5TEA6 688 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 PHACTR4Q8IZ21 702 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 FSTL5Q8N475 847 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 CCDC185Q8N715 623 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 TMIEQ8NEW7 156 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 JPH3Q8WXH2 748 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 SLC45A3Q96JT2 553 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 SNRNP25Q9BV90 132 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 LRRC61Q9BV99 259 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 HDAC8Q9BY41 377 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 DHX35Q9H5Z1 703 aaKnown RBP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 RETREG1Q9H6L5 497 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 DKK3Q9UBP4 350 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 GULP1Q9UBP9 304 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 OR12D3Q9UGF7 316 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 RABGEF1Q9UJ41 708 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 PACSIN2Q9UNF0 486 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 DOLKQ9UPQ8 538 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 EFR3BQ9Y2G0 817 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 CRYBG3Q68DQ2 2970 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 CSMD1Q96PZ7 3565 aa13.63□□□□□ -0.23
RAPGEF1-204ENST00000414781 H3BRJ5 948 aa13.62□□□□□ -0.23
RAPGEF1-204ENST00000414781 SEMA7AO75326 666 aa13.62□□□□□ -0.23
RAPGEF1-204ENST00000414781 PAGE1O75459 146 aa13.62□□□□□ -0.23
RAPGEF1-204ENST00000414781 PRNPP04156 253 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms