RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 LIPT2A6NK58 231 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 LACTBL1A8MY62 500 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZIC3O60481 467 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 ACAA1P09110 424 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 IGHV4-30-4P0DP06 118 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 FCGR1AP12314 374 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 CCKARP32238 428 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 PBX3P40426 434 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 GEMIN4P57678 1058 aaKnown RBP3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZXDBP98169 803 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 SETQ01105 290 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 ERV3-1Q14264 604 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 HLFQ16534 295 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 AMZ1Q400G9 498 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 MMEL1Q495T6 779 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 CXorf66Q5JRM2 361 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 HAUS3Q68CZ6 603 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 TSSK4Q6SA08 328 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 CYP20A1Q6UW02 462 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 FJX1Q86VR8 437 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 ARHGAP12Q8IWW6 846 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 ANKRD52Q8NB46 1076 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 WFIKKN2Q8TEU8 576 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 SGCDQ92629 289 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 NEUROG1Q92886 237 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 TMEM68Q96MH6 324 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 TMEM47Q9BQJ4 181 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZPBPQ9BS86 351 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 C1QTNF5Q9BXJ0 243 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 IL25Q9H293 177 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 KCNN2Q9H2S1 579 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 HIPK2Q9H2X6 1198 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 HINT3Q9NQE9 182 aaKnown RBP3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 EHD2Q9NZN4 543 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 ADAM18Q9Y3Q7 739 aa3.86□□□□□ -1.79
HMGB1P11-201ENST00000413899 SYNJ1O43426 1573 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 LINC01553A4QN01 128 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 PROB1E7EW31 1015 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 SNAP23O00161 211 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 NDUFS7O75251 213 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 IPO7O95373 1038 aaKnown RBP3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 EIF2S1P05198 315 aaKnown RBP3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 CYC1P08574 325 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZNF182P17025 639 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 ITGB8P26012 769 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 SORDQ00796 357 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 NIPAL4Q0D2K0 466 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 KIF5AQ12840 1032 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 MAMLD1Q13495 774 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 EIF4A2Q14240 407 aaKnown RBP3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 NFATC4Q14934 902 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 HYIQ5T013 277 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 GGNBP1Q5YKI7 109 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 HIST2H2BCQ6DN03 193 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 HIST2H2BDQ6DRA6 164 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 B3GNT6Q6ZMB0 384 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 PQLC2Q6ZP29 291 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 RBM23Q86U06 439 aaKnown RBP3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 HAPLN4Q86UW8 402 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 FOXRED2Q8IWF2 684 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 SPATA6LQ8N4H0 392 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 FRMD1Q8N878 549 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 CREB3L4Q8TEY5 395 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 ARHGEF2Q92974 986 aaKnown RBP3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 THOC3Q96J01 351 aaKnown RBP3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 MEIS3Q99687 375 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 TREX2Q9BQ50 279 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 SPRY4Q9C004 299 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 C17orf75Q9HAS0 396 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 MMP25Q9NPA2 562 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 LTB4R2Q9NPC1 389 aa3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 ATXN2Q99700 1313 aaKnown RBP3.85□□□□□ -1.79
HMGB1P11-201ENST00000413899 IGLV5-37A0A075B6J1 123 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 FAM237BA0A1B0GVD1 139 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 GOLGA6L9A6NEM1 432 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 SCAMP1O15126 338 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 HCRTR2O43614 444 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 PLRG1O43660 514 aaKnown RBP3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 SLC28A2O43868 658 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 RNASEH2AO75792 299 aaKnown RBP3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 T-ENOLP0DO92 83 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 ACADMP11310 421 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 KRT10P13645 584 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 STX2P32856 288 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 ARL3P36405 182 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 EIF5P55010 431 aaKnown RBP3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 DSCR9P59020 149 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZBED6P86452 979 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 CEBPZQ03701 1054 aaKnown RBP3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 GOLGA8DPQ0D2H9 430 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 KEAP1Q14145 624 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 FRG1Q14331 258 aaKnown RBP3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 OASLQ15646 514 aaKnown RBP3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 SETMARQ53H47 684 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 SLC45A4Q5BKX6 768 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 CCDC30Q5VVM6 783 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 TTI2Q6NXR4 508 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 SARM1Q6SZW1 724 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZNF114Q8NC26 417 aa3.84□□□□□ -1.79
HMGB1P11-201ENST00000413899 MAGEC3Q8TD91 643 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms