RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	GLT6D1	Q7Z4J2	308 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	RABEPK	Q7Z6M1	372 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	RAVER1	Q8IY67	606 aa	Known RBP	13.17	□□□□□ -0.3
SF1-206	ENST00000413725	DENND6B	Q8NEG7	585 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	BLOC1S5	Q8TDH9	187 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	PIGK	Q92643	395 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	SERAC1	Q96JX3	654 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	MIR1-1HG	Q9H1L0	117 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	ZFYVE1	Q9HBF4	777 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	PKD2L2	Q9NZM6	624 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	SUSD2	Q9UGT4	822 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	GMEB2	Q9UKD1	530 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	SHOC2	Q9UQ13	582 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	COQ6	Q9Y2Z9	468 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	RIF1	Q5UIP0	2472 aa	Known RBP	13.17	□□□□□ -0.3
SF1-206	ENST00000413725	EFCAB8	A8MWE9	144 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	DNALI1	O14645	258 aa	Predicted RBP	13.16	□□□□□ -0.3
SF1-206	ENST00000413725	WNT9A	O14904	365 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	RAD51C	O43502	376 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	RECQL5	O94762	991 aa	Predicted RBP	13.16	□□□□□ -0.3
SF1-206	ENST00000413725	EPN2	O95208	641 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	CLDN7	O95471	211 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	PAK4	O96013	591 aa	Predicted RBP	13.16	□□□□□ -0.3
SF1-206	ENST00000413725	LMNA	P02545	664 aa	Known RBP	13.16	□□□□□ -0.3
SF1-206	ENST00000413725	SLC4A1	P02730	911 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	MAOB	P27338	520 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	HOXD12	P35452	270 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	STC1	P52823	247 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	TERF1	P54274	439 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	FGL2	Q14314	439 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	PTPRR	Q15256	657 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	KCTD19	Q17RG1	926 aa	Predicted RBP	13.16	□□□□□ -0.3
SF1-206	ENST00000413725	DENND5A	Q6IQ26	1287 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	C8orf74	Q6P047	294 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	HSD11B1L	Q7Z5J1	315 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	SYT12	Q8IV01	421 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	PPIL6	Q8IXY8	311 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	SUMF1	Q8NBK3	374 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	OR52K1	Q8NGK4	314 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	CPT1B	Q92523	772 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	NUS1	Q96E22	293 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	SNF8	Q96H20	258 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	COQ10A	Q96MF6	247 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	TRIM51	Q9BSJ1	452 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	RAB17	Q9H0T7	212 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	CASS4	Q9NQ75	786 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	RAD18	Q9NS91	495 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	PILRB	Q9UKJ0	227 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	UTP11	Q9Y3A2	253 aa	Known RBP	13.16	□□□□□ -0.3
SF1-206	ENST00000413725	PCDHGA5	Q9Y5G8	931 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	SPO11	Q9Y5K1	396 aa		13.16	□□□□□ -0.3
SF1-206	ENST00000413725	ATXN2	Q99700	1313 aa	Known RBP	13.15	□□□□□ -0.3
SF1-206	ENST00000413725	RGSL1	A5PLK6	1076 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	C2orf81	A6NN90	581 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	PRR5-ARHGAP8	B1AHC4	643 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	BCAT2	O15382	392 aa	Predicted RBP	13.15	□□□□□ -0.3
SF1-206	ENST00000413725	CRTAM	O95727	393 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	C1S	P09871	688 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	PDE1B	Q01064	536 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	PTS	Q03393	145 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	LAMB3	Q13751	1172 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	STAT4	Q14765	748 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	LRRC14	Q15048	493 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	AGER	Q15109	404 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	TAF1A	Q15573	450 aa	Predicted RBP	13.15	□□□□□ -0.3
SF1-206	ENST00000413725	CDKN3	Q16667	212 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	IZUMO3	Q5VZ72	239 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	TMC3	Q7Z5M5	1100 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	HOOK3	Q86VS8	718 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	NRSN1	Q8IZ57	195 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	MMGT1	Q8N4V1	131 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	ZCCHC9	Q8N567	271 aa	Known RBP	13.15	□□□□□ -0.3
SF1-206	ENST00000413725	BBOF1	Q8ND07	529 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	MCU	Q8NE86	351 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	CEP76	Q8TAP6	659 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	FAM174A	Q8TBP5	190 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	BRSK1	Q8TDC3	778 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	DTD2	Q96FN9	168 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	LENG8	Q96PV6	779 aa	Predicted RBP	13.15	□□□□□ -0.3
SF1-206	ENST00000413725	MYOC	Q99972	504 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	ORAI3	Q9BRQ5	295 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	CARD6	Q9BX69	1037 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	TRIM31	Q9BZY9	425 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	XAB2	Q9HCS7	855 aa	Known RBP	13.15	□□□□□ -0.3
SF1-206	ENST00000413725	AASDHPPT	Q9NRN7	309 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	PIH1D1	Q9NWS0	290 aa	Known RBP	13.15	□□□□□ -0.3
SF1-206	ENST00000413725	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
SF1-206	ENST00000413725	PKP3	Q9Y446	797 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725	EP300	Q09472	2414 aa	Predicted RBP	13.15	□□□□□ -0.3
SF1-206	ENST00000413725	LRP4	O75096	1905 aa		13.15	□□□□□ -0.3
SF1-206	ENST00000413725		A0A0U1RQS6	177 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725		A0A1B0GTW7	788 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	TCRBV7S3A2	A0A539	114 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	GOLGA8CP	A6NN73	597 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	PROB1	E7EW31	1015 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	SMAP	O00193	183 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	FPGT	O14772	594 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	RET	P07949	1114 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	TPH1	P17752	444 aa		13.14	□□□□□ -0.31
SF1-206	ENST00000413725	LPO	P22079	712 aa	Predicted RBP	13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms