RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 TXNDC16Q9P2K2 825 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 LIMD1Q9UGP4 676 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 PHTF1Q9UMS5 762 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 PPIL1Q9Y3C6 166 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 STARD13Q9Y3M8 1113 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 PIAS3Q9Y6X2 628 aa6.66□□□□□ -1.34
VPS41-204ENST00000413141 TCF20Q9UGU0 1960 aaKnown RBP6.66□□□□□ -1.34
VPS41-204ENST00000413141 A0A0U1RQS6 177 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 C1orf232A0A0U1RR37 186 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 A0A1W2PPM1 405 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 CCDC162PA2VCL2 907 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 UPK3BL1B0FP48 263 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 UPK3BL2E5RIL1 263 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 K7EQS6 105 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 NPC1O15118 1278 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 STX7O15400 261 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 NARSO43776 548 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 ALDOAP04075 364 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 PRNPP04156 253 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 EPHX1P07099 455 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 ITGA2BP08514 1039 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SNRPAP09012 282 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 BRAFP15056 766 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 IL9P15248 144 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 CREB1P16220 341 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 KRT4P19013 534 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 OGNP20774 298 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 ITGB7P26010 798 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 GABRB3P28472 473 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 FOXN2P32314 431 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SPRP35270 261 aaPredicted RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 MMP12P39900 470 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 HADHAP40939 763 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 CCNFP41002 786 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 TNFRSF4P43489 277 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 KIR2DL1P43626 348 aaPredicted RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 ABCG1P45844 678 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 ATP1A2P50993 1020 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 GYS2P54840 703 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SEC13P55735 322 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 POLR2LP62875 67 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 CTBP1Q13363 440 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SEMA3AQ14563 771 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 PON2Q15165 354 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 E2F5Q15329 346 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 UGP2Q16851 508 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 TYSND1Q2T9J0 566 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 ZNF805Q5CZA5 627 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 TMEM196Q5HYL7 178 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 LRRC73Q5JTD7 316 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 HABP4Q5JVS0 413 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 LGSNQ5TDP6 509 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 MROH9Q5TGP6 573 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 LRRC66Q68CR7 880 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 FSTL4Q6MZW2 842 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 NEPROQ6NW34 567 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 TPRG1Q6ZUI0 275 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 PARS2Q7L3T8 475 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 PTAR1Q7Z6K3 402 aaPredicted RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 GALNT7Q86SF2 657 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 TSPAN33Q86UF1 283 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 ZC3HC1Q86WB0 502 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 CILP2Q8IUL8 1156 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 NDUFAF2Q8N183 169 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 C4orf33Q8N1A6 199 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 STK40Q8N2I9 435 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 ARFGAP2Q8N6H7 521 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 OTUD6BQ8N6M0 293 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 ZNF513Q8N8E2 541 aaPredicted RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 TMIEQ8NEW7 156 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 GPR150Q8NGU9 434 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 OR6P1Q8NGX9 317 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 CALML6Q8TD86 181 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 HCAR2Q8TDS4 363 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 ISL2Q96A47 359 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SCRN2Q96FV2 425 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 ATXN7L3BQ96GX2 97 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 MSANTD3Q96H12 275 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 CDKN2AIPNLQ96HQ2 116 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SGSM3Q96HU1 749 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 VPS39Q96JC1 886 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SERAC1Q96JX3 654 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 TBATAQ96M53 351 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SMC6Q96SB8 1091 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 KLF6Q99612 283 aaPredicted RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 GPR22Q99680 433 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SELENOSQ9BQE4 189 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 GPR63Q9BZJ6 419 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 RHOJQ9H4E5 214 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 C8orf33Q9H7E9 229 aaPredicted RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 SUDS3Q9H7L9 328 aaPredicted RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 CNOT10Q9H9A5 744 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 ZFYVE1Q9HBF4 777 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 SSU72Q9NP77 194 aaKnown RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 CATSPERZQ9NTU4 200 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 IL17CQ9P0M4 197 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 MARCH4Q9P2E8 410 aaPredicted RBP6.65□□□□□ -1.34
VPS41-204ENST00000413141 DKK3Q9UBP4 350 aa6.65□□□□□ -1.34
VPS41-204ENST00000413141 B4GALT6Q9UBX8 382 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms