RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TAAR9Q96RI9 348 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 GEMIN8Q9NWZ8 242 aaKnown RBP16.73■□□□□ 0.27
MRPL55-220ENST00000411464 KCTD5Q9NXV2 234 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 SIK3Q9Y2K2 1263 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 AHCTF1Q8WYP5 2266 aa16.73■□□□□ 0.27
MRPL55-220ENST00000411464 CHD5Q8TDI0 1954 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 TRAFD1O14545 582 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-220ENST00000411464 ECEL1O95672 775 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 GM2AP17900 193 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 CD1CP29017 333 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 GPR3P46089 330 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 IL10RBQ08334 325 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 ERMARDQ5T6L9 678 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 CDKAL1Q5VV42 579 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 ZNF574Q6ZN55 896 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-220ENST00000411464 RFX8Q6ZV50 586 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 C17orf82Q86X59 251 aaPredicted RBP16.72■□□□□ 0.27
MRPL55-220ENST00000411464 MCOLN2Q8IZK6 566 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 PELI3Q8N2H9 469 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 RCBTB1Q8NDN9 531 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 CCDC112Q8NEF3 446 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 HTR3CQ8WXA8 447 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 COQ10AQ96MF6 247 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 PSKH2Q96QS6 385 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 NUDT22Q9BRQ3 303 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 TRNAU1APQ9NX07 287 aaKnown RBP16.72■□□□□ 0.27
MRPL55-220ENST00000411464 TAAR2Q9P1P5 351 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 B4GALT6Q9UBX8 382 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 SEPT3Q9UH03 358 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 SPTA1P02549 2419 aa16.72■□□□□ 0.27
MRPL55-220ENST00000411464 IGHV5-10-1A0A0J9YXX1 117 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.71■□□□□ 0.27
MRPL55-220ENST00000411464 A0A1W2PQ67 120 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 CEACAM5P06731 702 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 CCDC172P0C7W6 258 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 FGF3P11487 239 aaPredicted RBP16.71■□□□□ 0.27
MRPL55-220ENST00000411464 ERCC2P18074 760 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 PSMA2P25787 234 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 NFKBIAP25963 317 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 GNPDA1P46926 289 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 OGDHQ02218 1023 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 TRA2AQ13595 282 aaKnown RBP eCLIP16.71■□□□□ 0.27
MRPL55-220ENST00000411464 NR1D2Q14995 579 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 CLCA4Q14CN2 919 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 CA9Q16790 459 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 DENND2CQ68D51 928 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 ACAD10Q6JQN1 1059 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 BORAQ6PGQ7 559 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 SLC30A9Q6PML9 568 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 HEATR4Q86WZ0 1026 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 NRROSQ86YC3 692 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 IL22RA1Q8N6P7 574 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 ANKRD20A12PQ8NF67 263 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 PDCD6IPQ8WUM4 868 aaKnown RBP16.71■□□□□ 0.27
MRPL55-220ENST00000411464 NKD1Q969G9 470 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 CCDC74BQ96LY2 380 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 FUCA2Q9BTY2 467 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 TEX101Q9BY14 249 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 ADNPQ9H2P0 1102 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 PARVAQ9NVD7 372 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 PCSK1NQ9UHG2 260 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 PCDHGA3Q9Y5H0 932 aa16.71■□□□□ 0.27
MRPL55-220ENST00000411464 GOLGA6CA6NDK9 693 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 GOLGA6BA6NDN3 693 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 FUCA1P04066 466 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 GOLGA6DP0CG33 693 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 AK4P27144 223 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-220ENST00000411464 CSTF2P33240 577 aaKnown RBP eCLIP16.7■□□□□ 0.26
MRPL55-220ENST00000411464 LIMK2P53671 638 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 LBRQ14739 615 aaKnown RBP16.7■□□□□ 0.26
MRPL55-220ENST00000411464 PPP6R3Q5H9R7 873 aaPredicted RBP16.7■□□□□ 0.26
MRPL55-220ENST00000411464 ARHGAP36Q6ZRI8 547 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 ARHGAP12Q8IWW6 846 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 AGBL5Q8NDL9 886 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 OR4D9Q8NGE8 314 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 SLC12A9Q9BXP2 914 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 FANCLQ9NW38 375 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 GOLGA6AQ9NYA3 693 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 PCDHGC4Q9Y5F7 938 aa16.7■□□□□ 0.26
MRPL55-220ENST00000411464 TTC24A2A3L6 582 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-220ENST00000411464 PRPSAP2O60256 369 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 RNF8O76064 485 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 HEXIM1O94992 359 aaKnown RBP16.69■□□□□ 0.26
MRPL55-220ENST00000411464 CYP2A6P11509 494 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-220ENST00000411464 VIPR1P32241 457 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 COPB1P53618 953 aaKnown RBP16.69■□□□□ 0.26
MRPL55-220ENST00000411464 CDK3Q00526 305 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 CTBSQ01459 385 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 UBXN1Q04323 297 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 TLE1Q04724 770 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 SLC10A7Q0GE19 358 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 MAMLD1Q13495 774 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 ZNF235Q14590 738 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 CNGA3Q16281 694 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 COLEC12Q5KU26 742 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 TMCO4Q5TGY1 634 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 NKAIN2Q5VXU1 208 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 PPP1R2P3Q6NXS1 205 aa16.69■□□□□ 0.26
MRPL55-220ENST00000411464 LZTR1Q8N653 840 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms