RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 RRN3P2A6NIE6 340 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ASB14A6NK59 587 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 RHPN2P1A8MT19 583 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 TRIM49D1C9J1S8 452 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 E7ENQ6 273 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZIC3O60481 467 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 DPM1O60762 260 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 MED6O75586 246 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAM155BO75949 473 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 STBD1O95210 358 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRAMEF12O95522 483 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 CRTAMO95727 393 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 KRT8P05787 483 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ACSM4P0C7M7 580 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 FOLR2P14207 255 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 CD1EP15812 388 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 PTPN3P26045 913 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 GIFP27352 417 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ACADLP28330 430 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 STK19P49842 368 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ST13P50502 369 aaKnown RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 FUT6P51993 359 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 SUCLG1P53597 346 aaKnown RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 MN1Q10571 1320 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 RAB40BQ12829 278 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 DLG1Q12959 904 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 BAMBIQ13145 260 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 SP140Q13342 867 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 GAB1Q13480 694 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 PTK2BQ14289 1009 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 PPP2R5BQ15173 497 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 DUSP5Q16690 384 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 KRTAP25-1Q3LHN0 102 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 EIPR1Q53HC9 387 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPECC1Q5M775 1068 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 DNLZQ5SXM8 178 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 FRYQ5TBA9 3013 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 RALGAPA1Q6GYQ0 2036 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAM71E1Q6IPT2 247 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 CGB2Q6NT52 195 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 DNAJC24Q6P3W2 148 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 NOTUMQ6P988 496 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 DCDC5Q6ZRR9 648 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ANO5Q75V66 913 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRSS41Q7RTY9 318 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 DSG4Q86SJ6 1040 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 WDFY1Q8IWB7 410 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ADGRF5Q8IZF2 1346 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ADSSL1Q8N142 457 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 C1orf64Q8NEQ6 169 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 IL17REQ8NFR9 667 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 RHOXF1Q8NHV9 184 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 MRAPQ8TCY5 172 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 RUFY2Q8WXA3 655 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 SREK1Q8WXA9 508 aaKnown RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 FBXW5Q969U6 566 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF625Q96I27 306 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 C1orf147Q96MC9 270 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF184Q99676 751 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 PSD2Q9BQI7 771 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 FDXACB1Q9BRP7 624 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 CNPPD1Q9BV87 410 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 LRRC61Q9BV99 259 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 STK33Q9BYT3 514 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 TRIM54Q9BYV2 358 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 OSBPL5Q9H0X9 879 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPNS1Q9H2V7 528 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF335Q9H4Z2 1342 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 EPS8L2Q9H6S3 715 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 PANK3Q9H999 370 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF287Q9HBT7 754 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 WRAP73Q9P2S5 460 aaPredicted RBP-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 LRWD1Q9UFC0 647 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 MTUS1Q9ULD2 1270 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 SLC45A2Q9UMX9 530 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 PLEKHA6Q9Y2H5 1048 aa-1.53□□□□□ -2.65
RNU4-88P-201ENST00000411220 CSPG4Q6UVK1 2322 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 KDM6BO15054 1643 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 A0A1W2PNM2 257 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 MEX3AA1L020 520 aaKnown RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 C19orf71A6NCJ1 209 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF860A6NHJ4 632 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 VGLL3A8MV65 326 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 M0R378 163 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 PLA2G10O15496 165 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 FFAR2O15552 330 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 AP1G1O43747 822 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 LIASO43766 372 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 HBP1O60381 514 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 OFD1O75665 1012 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 LETM1O95202 739 aaPredicted RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 TGM6O95932 706 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 IGLV1-47P01700 117 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 MT2AP02795 61 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 RAB40ALP0C0E4 278 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 THEGLP0DJG4 465 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 PYGMP11217 842 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 TOP1P11387 765 aaKnown RBP-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 CHATP28329 748 aa-1.54□□□□□ -2.66
RNU4-88P-201ENST00000411220 TGFBR1P36897 503 aa-1.54□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms