RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 C6orf132Q5T0Z8 1188 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 CDCP2Q5VXM1 449 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 GUSBP11Q6P575 273 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 NPNTQ6UXI9 565 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 RFLNAQ6ZTI6 216 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 GAS2L3Q86XJ1 694 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 RHOT1Q8IXI2 618 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 SLC35F3Q8IY50 421 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 CNTD1Q8N815 330 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 IFI44Q8TCB0 444 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 NUS1Q96E22 293 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 GOLPH3Q9H4A6 298 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 FGF22Q9HCT0 170 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 MRPL40Q9NQ50 206 aaKnown RBP17.72■□□□□ 0.43
LSM5-204ENST00000409909 CLCA2Q9UQC9 943 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 CHKBQ9Y259 395 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 PCDHA13Q9Y5I0 950 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 DGKBQ9Y6T7 804 aa17.72■□□□□ 0.43
LSM5-204ENST00000409909 CACNB4O00305 520 aaPredicted RBP17.71■□□□□ 0.43
LSM5-204ENST00000409909 MT-CO3P00414 261 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 MMP2P08253 660 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 CTSEP14091 401 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 ZBTB17Q13105 803 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 ELOCQ15369 112 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 NR0B2Q15466 257 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 CRTC1Q6UUV9 634 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 MFSD7Q6UXD7 560 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 Q6ZVL8 140 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 USP45Q70EL2 814 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 EFL1Q7Z2Z2 1120 aaKnown RBP17.71■□□□□ 0.43
LSM5-204ENST00000409909 TECPR1Q7Z6L1 1165 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 CCDC170Q8IYT3 715 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 FSTL5Q8N475 847 aaPredicted RBP17.71■□□□□ 0.43
LSM5-204ENST00000409909 OR56A4Q8NGH8 313 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 ATL2Q8NHH9 583 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 DTD2Q96FN9 168 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 MRFAP1L1Q96HT8 127 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 TDRD1Q9BXT4 1180 aaKnown RBP17.71■□□□□ 0.43
LSM5-204ENST00000409909 MAK16Q9BXY0 300 aaKnown RBP17.71■□□□□ 0.43
LSM5-204ENST00000409909 WDR26Q9H7D7 661 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 NCKIPSDQ9NZQ3 722 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 RAXQ9Y2V3 346 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 ALG6Q9Y672 507 aa17.71■□□□□ 0.43
LSM5-204ENST00000409909 URB1O60287 2271 aaKnown RBP17.71■□□□□ 0.43
LSM5-204ENST00000409909 A0A0J9YYE9 177 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 EME2A4GXA9 379 aaPredicted RBP17.7■□□□□ 0.42
LSM5-204ENST00000409909 PSMD11O00231 422 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 APOL1O14791 398 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 CASC3O15234 703 aaKnown RBP17.7■□□□□ 0.42
LSM5-204ENST00000409909 SPOPO43791 374 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 TNFP01375 233 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 TRBC1P01850 177 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 NFKBIAP25963 317 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 NOP2P46087 812 aaKnown RBP17.7■□□□□ 0.42
LSM5-204ENST00000409909 IFI35P80217 286 aaPredicted RBP17.7■□□□□ 0.42
LSM5-204ENST00000409909 PTSQ03393 145 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 TAZQ16635 292 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 PERM1Q5SV97 790 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 LRRC66Q68CR7 880 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 B4GALNT4Q76KP1 1039 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 RFX6Q8HWS3 928 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.7■□□□□ 0.42
LSM5-204ENST00000409909 ZNF830Q96NB3 372 aaPredicted RBP17.7■□□□□ 0.42
LSM5-204ENST00000409909 OLFM3Q96PB7 478 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 PANX2Q96RD6 677 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 RBM15Q96T37 977 aaKnown RBP eCLIP17.7■□□□□ 0.42
LSM5-204ENST00000409909 TEX101Q9BY14 249 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 EVA1BQ9NVM1 165 aa17.7■□□□□ 0.42
LSM5-204ENST00000409909 DDX56Q9NY93 547 aaKnown RBP17.7■□□□□ 0.42
LSM5-204ENST00000409909 TNFRSF10CO14798 259 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 FUCA1P04066 466 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 TGM2P21980 687 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 CDKN2BP42772 138 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 DYNLT1P63172 113 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 AP1B1Q10567 949 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 ARHGEF7Q14155 803 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 LVRNQ6Q4G3 990 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 HEATR4Q86WZ0 1026 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 MAPK15Q8TD08 544 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 CEP41Q9BYV8 373 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 NRSN2Q9GZP1 204 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 ABCG4Q9H172 646 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 SAE1Q9UBE0 346 aaPredicted RBP17.69■□□□□ 0.42
LSM5-204ENST00000409909 CD84Q9UIB8 345 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 PCDHB1Q9Y5F3 818 aa17.69■□□□□ 0.42
LSM5-204ENST00000409909 RCCD1A6NED2 376 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 SOWAHDA6NJG2 315 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 CEACAM5P06731 702 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 MYCLP1P12525 358 aaPredicted RBP17.68■□□□□ 0.42
LSM5-204ENST00000409909 KRT10P13645 584 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 ZFXP17010 805 aaPredicted RBP17.68■□□□□ 0.42
LSM5-204ENST00000409909 FECHP22830 423 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 KELP23276 732 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 CD86P42081 329 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 RPIAP49247 311 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 EPHB1P54762 984 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 SKOR1P84550 965 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 ADCY2Q08462 1091 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 RTP5Q14D33 572 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 PDK1Q15118 436 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms