RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 XAGE5Q8WWM1 108 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 KLHL4Q9C0H6 718 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 NECTIN3Q9NQS3 549 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 MRPS17Q9Y2R5 130 aaKnown RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 MED31Q9Y3C7 131 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 PCDHA3Q9Y5H8 950 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 SLC28A1O00337 649 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 EIF1AYO14602 144 aaKnown RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 NEK3P51956 506 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 KRR1Q13601 381 aaKnown RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 DCLRE1AQ6PJP8 1040 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 TBC1D10AQ9BXI6 508 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 HCN2Q9UL51 889 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 ABCC3O15438 1527 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 SSU72P8A0A1W2PR75 194 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 AKAP8O43823 692 aaKnown RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 YAP1P46937 504 aaKnown RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 NRIP1P48552 1158 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 BOLLQ8N9W6 283 aaKnown RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 C3orf20Q8ND61 904 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 RMND5BQ96G75 393 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 GORASP1Q9BQQ3 440 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 BRF2Q9HAW0 419 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 EGFL7Q9UHF1 273 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 IKZF3Q9UKT9 509 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 RPH3AQ9Y2J0 694 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 PIK3CDO00329 1044 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 LDB2O43679 373 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 NR2C2P49116 596 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 FAAP100Q0VG06 881 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 KRT74Q7RTS7 529 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 DHFR2Q86XF0 187 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 TMEM86AQ8N2M4 240 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 TEX47Q8TBZ9 253 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 EEF1AKMT1Q8WVE0 214 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 CTPS2Q9NRF8 586 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 DDX18Q9NVP1 670 aaKnown RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 SATB2Q9UPW6 733 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 TET3O43151 1660 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 A0A087X1B8 175 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 HCN1O60741 890 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 ALOX5P09917 674 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF806P0C7X5 589 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 HGFP14210 728 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 C4BPBP20851 252 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 MSX2P35548 267 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 VLDLRP98155 873 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 ALG1LQ6GMV1 187 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 CCNI2Q6ZMN8 369 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 AMIGO1Q86WK6 493 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 RIOX2Q8IUF8 465 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 SGCDQ92629 289 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 BDH2Q9BUT1 245 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 C11orf49Q9H6J7 331 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 NUP50Q9UKX7 468 aa8.42□□□□□ -1.06
SCN9A-203ENST00000409672 POLR3HQ9Y535 204 aaPredicted RBP8.42□□□□□ -1.06
SCN9A-203ENST00000409672 WWP2O00308 870 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ANXA6P08133 673 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 UGT1A5P35504 534 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 CASRP41180 1078 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 RPL21P46778 160 aaKnown RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SLC6A9P48067 706 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 UNC5AQ6ZN44 842 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 DGLUCYQ7Z3D6 616 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 LRRC49Q8IUZ0 686 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 KBTBD2Q8IY47 623 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 CLIP4Q8N3C7 705 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 RIBC1Q8N443 379 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 THAP3Q8WTV1 239 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 WDR60Q8WVS4 1066 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 OVCA2Q8WZ82 227 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 YDJCA8MPS7 323 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 RSL1D1O76021 490 aaKnown RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SERPINA3P01011 423 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ENPEPQ07075 957 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 MPP5Q8N3R9 675 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 PTGR2Q8N8N7 351 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 BHLHE22Q8NFJ8 381 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 HBEGFQ99075 208 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 APOL4Q9BPW4 351 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ISCUQ9H1K1 167 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 IL17RBQ9NRM6 502 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SMAD9O15198 467 aaKnown RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 PAGE1O75459 146 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 HNRNPLP14866 589 aaKnown RBP eCLIP8.41□□□□□ -1.065e-7■■□□□ 13.8
SCN9A-203ENST00000409672 SLC6A2P23975 617 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 FPGSQ05932 587 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SCN1BQ07699 218 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 FCHO2Q0JRZ9 810 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 GRIK5Q16478 980 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 TCEAL6Q6IPX3 200 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ZFP28Q8NHY6 868 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 LCN9Q8WX39 176 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 CDRT15Q96T59 188 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 SRMSQ9H3Y6 488 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 PHPT1Q9NRX4 125 aaPredicted RBP8.41□□□□□ -1.06
SCN9A-203ENST00000409672 EHD3Q9NZN3 535 aa8.41□□□□□ -1.06
SCN9A-203ENST00000409672 ADAM28Q9UKQ2 775 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms